Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ZIC3O60481 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ZIC3O60481 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.01□□□□□ -1.45
ZIC3O60481 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ZIC3O60481 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ZIC3O60481 MTCO1P25-201ENST00000414449 1799 ntBASIC6.01□□□□□ -1.45
ZIC3O60481 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
ZIC3O60481 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
ZIC3O60481 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
ZIC3O60481 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
ZIC3O60481 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6□□□□□ -1.45
ZIC3O60481 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 MAPK10-357ENST00000641831 2858 ntBASIC6□□□□□ -1.45
ZIC3O60481 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 RN7SKP184-201ENST00000362348 333 ntBASIC6□□□□□ -1.45
ZIC3O60481 VTRNA3-1P-201ENST00000362552 102 ntBASIC6□□□□□ -1.45
ZIC3O60481 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 U3.52-201ENST00000384034 216 ntBASIC6□□□□□ -1.45
ZIC3O60481 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 AC096537.2-201ENST00000413707 714 ntBASIC6□□□□□ -1.45
ZIC3O60481 AL929472.1-201ENST00000417484 429 ntBASIC6□□□□□ -1.45
ZIC3O60481 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6□□□□□ -1.45
ZIC3O60481 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6□□□□□ -1.45
ZIC3O60481 NPM1P48-201ENST00000436002 853 ntBASIC6□□□□□ -1.45
ZIC3O60481 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
ZIC3O60481 GAPDHP37-201ENST00000442317 968 ntBASIC6□□□□□ -1.45
ZIC3O60481 TVP23CP1-201ENST00000450317 639 ntBASIC6□□□□□ -1.45
ZIC3O60481 RN7SL393P-201ENST00000463588 296 ntBASIC6□□□□□ -1.45
ZIC3O60481 CREM-242ENST00000490511 469 ntTSL 2 BASIC6□□□□□ -1.45
ZIC3O60481 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6□□□□□ -1.45
ZIC3O60481 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6□□□□□ -1.45
ZIC3O60481 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6□□□□□ -1.45
ZIC3O60481 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6□□□□□ -1.45
ZIC3O60481 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6□□□□□ -1.45
ZIC3O60481 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6□□□□□ -1.45
ZIC3O60481 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6□□□□□ -1.45
ZIC3O60481 MIR212-201ENST00000586026 110 ntBASIC6□□□□□ -1.45
ZIC3O60481 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6□□□□□ -1.45
ZIC3O60481 AC005014.3-201ENST00000605985 190 ntBASIC6□□□□□ -1.45
ZIC3O60481 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6□□□□□ -1.45
ZIC3O60481 AL008582.1-201ENST00000609612 442 ntBASIC6□□□□□ -1.45
ZIC3O60481 AC068726.1-201ENST00000610993 341 ntBASIC6□□□□□ -1.45
ZIC3O60481 AC005277.2-201ENST00000617898 390 ntBASIC6□□□□□ -1.45
ZIC3O60481 AC106730.3-201ENST00000624568 641 ntBASIC6□□□□□ -1.45
ZIC3O60481 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6□□□□□ -1.45
ZIC3O60481 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6□□□□□ -1.45
ZIC3O60481 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZIC3O60481 MROH3P-201ENST00000435735 2676 ntBASIC6□□□□□ -1.45
ZIC3O60481 AC083806.2-201ENST00000617795 2685 ntBASIC6□□□□□ -1.45
ZIC3O60481 AL596244.1-201ENST00000567068 3779 ntBASIC6□□□□□ -1.45
ZIC3O60481 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
ZIC3O60481 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
ZIC3O60481 BRD7P1-201ENST00000557705 1915 ntBASIC5.99□□□□□ -1.45
ZIC3O60481 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC5.99□□□□□ -1.45
ZIC3O60481 AC110597.1-201ENST00000562669 3176 ntBASIC5.99□□□□□ -1.45
ZIC3O60481 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
ZIC3O60481 NCOA4P3-201ENST00000513203 1877 ntBASIC5.99□□□□□ -1.45
ZIC3O60481 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.99□□□□□ -1.45
ZIC3O60481 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC5.99□□□□□ -1.45
ZIC3O60481 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ZIC3O60481 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
ZIC3O60481 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC5.99□□□□□ -1.45
ZIC3O60481 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ZIC3O60481 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
ZIC3O60481 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
ZIC3O60481 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
ZIC3O60481 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ZIC3O60481 AL049697.3-201ENST00000406493 982 ntBASIC5.99□□□□□ -1.45
ZIC3O60481 RANP6-201ENST00000413691 644 ntBASIC5.99□□□□□ -1.45
ZIC3O60481 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.99□□□□□ -1.45
ZIC3O60481 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC5.99□□□□□ -1.45
ZIC3O60481 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.99□□□□□ -1.45
ZIC3O60481 GAPDHP19-201ENST00000431768 1005 ntBASIC5.99□□□□□ -1.45
ZIC3O60481 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.99□□□□□ -1.45
ZIC3O60481 AC092106.2-201ENST00000436597 487 ntBASIC5.99□□□□□ -1.45
ZIC3O60481 NPM1P23-201ENST00000440193 849 ntBASIC5.99□□□□□ -1.45
ZIC3O60481 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.99□□□□□ -1.45
ZIC3O60481 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.99□□□□□ -1.45
ZIC3O60481 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.99□□□□□ -1.45
ZIC3O60481 KF459542.1-201ENST00000450908 553 ntBASIC5.99□□□□□ -1.45
ZIC3O60481 AP002371.1-201ENST00000463604 433 ntBASIC5.99□□□□□ -1.45
ZIC3O60481 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ZIC3O60481 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ZIC3O60481 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.99□□□□□ -1.45
ZIC3O60481 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.99□□□□□ -1.45
ZIC3O60481 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.99□□□□□ -1.45
ZIC3O60481 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms