Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC106785.2-201ENST00000564385 1319 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 CFI-207ENST00000618244 1345 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 DDX10P2-201ENST00000417796 2614 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 TTTY8B-201ENST00000328819 531 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 TTTY8-201ENST00000329684 531 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 LRRC72-202ENST00000401542 1000 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC233289.1-201ENST00000403700 508 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 RPS27A-203ENST00000404735 796 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 RNA5SP280-201ENST00000411230 115 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC023141.10-201ENST00000415634 200 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AL354707.3-201ENST00000427308 331 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC079779.2-202ENST00000427831 392 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC073900.1-201ENST00000429766 776 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 ABCC13-202ENST00000463099 3842 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC083806.1-201ENST00000468934 316 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC016546.1-201ENST00000473590 463 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 RPL23AP8-201ENST00000479812 475 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC093270.1-201ENST00000482584 486 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 RPL17P37-201ENST00000490729 548 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 RN7SL187P-201ENST00000495587 303 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC097518.1-201ENST00000512516 421 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 SETP21-201ENST00000514799 892 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AEBP2-207ENST00000541908 975 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC005833.4-201ENST00000542988 449 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 RPS26-203ENST00000552361 623 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 TP53TG3HP-201ENST00000563487 346 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 FRG2IP-201ENST00000563581 781 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 CTSLP2-201ENST00000580501 394 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC073911.1-201ENST00000592296 504 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC004918.3-201ENST00000602609 925 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC233280.2-201ENST00000603917 1070 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AL080250.1-202ENST00000607221 915 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC083862.2-201ENST00000608819 1145 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 Metazoa_SRP.85-201ENST00000610909 260 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 pRNA.10-201ENST00000613590 89 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 IGKV2OR2-10-201ENST00000613976 311 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC099654.4-201ENST00000614168 1059 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC126915.3-201ENST00000620111 208 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC022106.2-201ENST00000620114 757 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 uc_338.21-201ENST00000622458 147 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC090373.1-201ENST00000623955 603 ntBASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 METAP1-212ENST00000625963 147 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AL359736.3-201ENST00000626707 303 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01558Q9Y6Z2 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms