Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
SIN3AQ96ST3 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SIN3AQ96ST3 AC006213.6-201ENST00000623722 4179 ntBASIC9.34□□□□□ -0.91
SIN3AQ96ST3 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 AL645939.3-201ENST00000435408 225 ntBASIC9.34□□□□□ -0.91
SIN3AQ96ST3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 HMGN1P16-201ENST00000508308 283 ntBASIC9.34□□□□□ -0.91
SIN3AQ96ST3 RN7SKP98-201ENST00000517070 156 ntBASIC9.34□□□□□ -0.91
SIN3AQ96ST3 AC073916.1-201ENST00000545095 130 ntBASIC9.34□□□□□ -0.91
SIN3AQ96ST3 AC008055.1-201ENST00000547032 609 ntBASIC9.34□□□□□ -0.91
SIN3AQ96ST3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 RPL3P13-201ENST00000550415 216 ntBASIC9.34□□□□□ -0.91
SIN3AQ96ST3 AC138207.8-204ENST00000579588 527 ntBASIC9.34□□□□□ -0.91
SIN3AQ96ST3 SYPL1P2-201ENST00000582878 727 ntBASIC9.34□□□□□ -0.91
SIN3AQ96ST3 AL078623.1-201ENST00000602702 907 ntBASIC9.34□□□□□ -0.91
SIN3AQ96ST3 DRG1-207ENST00000629688 309 ntTSL 5 BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 AC110373.1-201ENST00000505994 3505 ntBASIC9.34□□□□□ -0.91
SIN3AQ96ST3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 EEF1A1P24-201ENST00000451469 1378 ntBASIC9.34□□□□□ -0.91
SIN3AQ96ST3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 AP002370.1-201ENST00000528055 1602 ntBASIC9.34□□□□□ -0.91
SIN3AQ96ST3 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC9.34□□□□□ -0.91
SIN3AQ96ST3 AL359195.2-201ENST00000623657 4412 ntBASIC9.34□□□□□ -0.91
SIN3AQ96ST3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
SIN3AQ96ST3 AC107980.1-201ENST00000558671 3355 ntBASIC9.33□□□□□ -0.92
SIN3AQ96ST3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SIN3AQ96ST3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SIN3AQ96ST3 U3.43-201ENST00000410734 213 ntBASIC9.33□□□□□ -0.92
SIN3AQ96ST3 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC9.33□□□□□ -0.92
SIN3AQ96ST3 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC9.33□□□□□ -0.92
SIN3AQ96ST3 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SIN3AQ96ST3 AC098818.1-201ENST00000478593 252 ntBASIC9.33□□□□□ -0.92
SIN3AQ96ST3 RPL29P23-201ENST00000486188 442 ntBASIC9.33□□□□□ -0.92
SIN3AQ96ST3 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
SIN3AQ96ST3 AC074141.1-201ENST00000588129 2995 ntBASIC9.33□□□□□ -0.92
SIN3AQ96ST3 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC9.33□□□□□ -0.92
SIN3AQ96ST3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC9.33□□□□□ -0.92
SIN3AQ96ST3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC9.33□□□□□ -0.92
SIN3AQ96ST3 AL008723.3-201ENST00000608926 449 ntBASIC9.33□□□□□ -0.92
SIN3AQ96ST3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC9.33□□□□□ -0.92
SIN3AQ96ST3 SAMMSON-214ENST00000641395 1264 ntBASIC9.33□□□□□ -0.92
SIN3AQ96ST3 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SIN3AQ96ST3 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
SIN3AQ96ST3 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SIN3AQ96ST3 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
SIN3AQ96ST3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC9.33□□□□□ -0.92
SIN3AQ96ST3 AC012213.2-201ENST00000562917 4597 ntBASIC9.32□□□□□ -0.92
SIN3AQ96ST3 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AL731556.1-201ENST00000394628 3711 ntBASIC9.32□□□□□ -0.92
SIN3AQ96ST3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 RN7SKP171-201ENST00000364417 303 ntBASIC9.32□□□□□ -0.92
SIN3AQ96ST3 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AC245036.1-201ENST00000391727 309 ntBASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AC002127.1-201ENST00000421305 225 ntBASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AC013403.1-201ENST00000436954 263 ntBASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AC009237.1-201ENST00000442127 744 ntBASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AC044810.1-201ENST00000480271 711 ntBASIC9.32□□□□□ -0.92
SIN3AQ96ST3 RPL9P15-201ENST00000491096 532 ntBASIC9.32□□□□□ -0.92
SIN3AQ96ST3 IGHV7-34-1-201ENST00000519200 350 ntBASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AC244034.2-201ENST00000562504 509 ntBASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AC012676.3-201ENST00000614983 479 ntBASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AL122023.1-201ENST00000622847 530 ntBASIC9.32□□□□□ -0.92
SIN3AQ96ST3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SIN3AQ96ST3 CUBNP3-201ENST00000457461 1784 ntBASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms