Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 SAMM50P1-201ENST00000455403 1399 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 TSPAN31-206ENST00000547992 3434 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 AC078881.1-201ENST00000507023 2161 ntTSL 2 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 AKAP2-202ENST00000374525 6866 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.96
LRCH3Q96II8 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.96
LRCH3Q96II8 PDCD4-201ENST00000280154 3602 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
LRCH3Q96II8 AC005539.1-201ENST00000443768 1479 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 RBMS2-204ENST00000550726 1452 ntTSL 2 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 ERG-204ENST00000398907 4809 ntTSL 5 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 WEE2-AS1-206ENST00000478332 2259 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 TXNRD1-204ENST00000429002 3855 ntTSL 5 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 MAPK10-260ENST00000641047 2546 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 CLEC4M-204ENST00000359059 1733 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AL445933.1-201ENST00000434240 2242 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC037487.1-201ENST00000583416 2474 ntTSL 5 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 ZSCAN9-204ENST00000527436 2062 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 MAN1A2P1-201ENST00000590286 1400 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 ELOVL2-201ENST00000354666 3997 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC093117.1-201ENST00000413541 2171 ntTSL 2 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 OR10H3-201ENST00000305892 951 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 OR51G2-201ENST00000322013 1023 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 RNA5SP378-201ENST00000363646 120 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 RPS3AP23-201ENST00000401762 784 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 AL356432.2-201ENST00000407841 422 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 RN7SKP56-201ENST00000410513 331 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC009237.9-201ENST00000414800 347 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 AL157698.1-201ENST00000415190 1011 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC023141.10-201ENST00000415634 200 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 MTND3P17-201ENST00000416968 344 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC015977.2-201ENST00000420852 567 ntTSL 3 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC113607.1-201ENST00000427019 589 ntTSL 4 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 GPM6BP2-201ENST00000432046 144 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 ARMC4P1-201ENST00000438905 707 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC002542.1-201ENST00000440683 193 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 UBE2Q1-AS1-201ENST00000441613 432 ntTSL 3 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 GPM6BP1-201ENST00000446387 144 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AL590639.1-201ENST00000456484 337 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC084871.2-201ENST00000503355 464 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 OR5M14P-201ENST00000506803 618 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AP002453.2-201ENST00000533503 320 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 HMGN1P26-201ENST00000558737 303 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC113349.2-201ENST00000607804 377 ntBASIC9.08□□□□□ -0.96
LRCH3Q96II8 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC124804.1-202ENST00000583712 4315 ntTSL 5 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 CALCOCO2-215ENST00000509507 1512 ntTSL 2 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AL513318.2-201ENST00000602579 2012 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 ZNF233-201ENST00000391958 2784 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 SEMA4D-207ENST00000420987 4275 ntTSL 5 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 SYNJ1-211ENST00000630077 6898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 BPNT1-205ENST00000469520 2737 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 ERVMER34-1-202ENST00000443173 3830 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 LINC00608-202ENST00000432733 2818 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 MCTP1-201ENST00000312216 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LRCH3Q96II8 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
LRCH3Q96II8 CDY15P-201ENST00000421995 1570 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 CDY22P-201ENST00000451423 1554 ntBASIC9.07□□□□□ -0.96
LRCH3Q96II8 FSHR-201ENST00000304421 2176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 NAALAD2-210ENST00000534061 3600 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LRCH3Q96II8 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms