Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RNF31Q96EP0 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.71□□□□□ -1.33
RNF31Q96EP0 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RNF31Q96EP0 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
RNF31Q96EP0 AC132219.2-201ENST00000624416 2327 ntBASIC6.71□□□□□ -1.33
RNF31Q96EP0 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
RNF31Q96EP0 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF31Q96EP0 GCNT6-201ENST00000379591 934 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF31Q96EP0 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 RNU6-564P-201ENST00000410983 104 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 AC007064.3-201ENST00000422608 359 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 PUDPP2-201ENST00000431423 643 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 LINC00328-2P-201ENST00000436585 219 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 AC009963.4-201ENST00000448535 339 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 MTCYBP14-201ENST00000457471 715 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 AP006587.5-201ENST00000532033 739 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 AC244034.2-201ENST00000562504 509 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 EIF4A3P1-201ENST00000578499 647 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 AL671309.1-201ENST00000603750 544 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 OR4H6P-202ENST00000603819 340 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 AL390877.1-201ENST00000605704 214 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RNF31Q96EP0 AC117490.2-201ENST00000610042 594 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 OR8A1-204ENST00000642111 1145 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RNF31Q96EP0 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF31Q96EP0 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF31Q96EP0 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RNF31Q96EP0 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RNF31Q96EP0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF31Q96EP0 CCNT2P1-201ENST00000423082 1315 ntBASIC6.71□□□□□ -1.34
RNF31Q96EP0 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF31Q96EP0 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF31Q96EP0 AC008957.3-201ENST00000624112 2242 ntBASIC6.7□□□□□ -1.34
RNF31Q96EP0 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF31Q96EP0 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
RNF31Q96EP0 AC095038.1-201ENST00000429248 1591 ntBASIC6.7□□□□□ -1.34
RNF31Q96EP0 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF31Q96EP0 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF31Q96EP0 ABCA11P-202ENST00000504019 2110 ntBASIC6.7□□□□□ -1.34
RNF31Q96EP0 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF31Q96EP0 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
RNF31Q96EP0 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF31Q96EP0 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF31Q96EP0 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF31Q96EP0 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF31Q96EP0 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF31Q96EP0 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF31Q96EP0 RN7SKP107-201ENST00000364157 290 ntBASIC6.7□□□□□ -1.34
RNF31Q96EP0 RPL12P1-201ENST00000374520 498 ntBASIC6.7□□□□□ -1.34
RNF31Q96EP0 MIR152-201ENST00000385212 87 ntBASIC6.7□□□□□ -1.34
RNF31Q96EP0 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF31Q96EP0 AL034417.1-201ENST00000399343 800 ntBASIC6.7□□□□□ -1.34
RNF31Q96EP0 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF31Q96EP0 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF31Q96EP0 RPL36P18-201ENST00000419316 318 ntBASIC6.7□□□□□ -1.34
RNF31Q96EP0 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF31Q96EP0 CHCHD3P1-201ENST00000425516 676 ntBASIC6.7□□□□□ -1.34
RNF31Q96EP0 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF31Q96EP0 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF31Q96EP0 MORF4L1P5-201ENST00000433352 961 ntBASIC6.7□□□□□ -1.34
RNF31Q96EP0 RPL3P11-201ENST00000434028 1146 ntBASIC6.7□□□□□ -1.34
RNF31Q96EP0 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF31Q96EP0 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF31Q96EP0 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF31Q96EP0 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF31Q96EP0 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF31Q96EP0 RPL31P11-202ENST00000454082 372 ntBASIC6.7□□□□□ -1.34
RNF31Q96EP0 AC010878.1-201ENST00000456500 1047 ntBASIC6.7□□□□□ -1.34
RNF31Q96EP0 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF31Q96EP0 RPS4XP17-201ENST00000479057 754 ntBASIC6.7□□□□□ -1.34
RNF31Q96EP0 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF31Q96EP0 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms