Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 RNA5SP440-201ENST00000612665 119 ntBASIC7.86□□□□□ -1.15
SNED1Q8TER0 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
SNED1Q8TER0 AL136981.1-203ENST00000451452 3844 ntBASIC7.85□□□□□ -1.15
SNED1Q8TER0 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.85□□□□□ -1.15
SNED1Q8TER0 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.85□□□□□ -1.15
SNED1Q8TER0 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SNED1Q8TER0 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SNED1Q8TER0 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SNED1Q8TER0 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.85□□□□□ -1.15
SNED1Q8TER0 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SNED1Q8TER0 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SNED1Q8TER0 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SNED1Q8TER0 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SNED1Q8TER0 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
SNED1Q8TER0 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SNED1Q8TER0 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SNED1Q8TER0 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
SNED1Q8TER0 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
SNED1Q8TER0 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
SNED1Q8TER0 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SNED1Q8TER0 U3.25-201ENST00000391209 220 ntBASIC7.85□□□□□ -1.15
SNED1Q8TER0 BRWD1P3-201ENST00000428816 390 ntBASIC7.85□□□□□ -1.15
SNED1Q8TER0 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.85□□□□□ -1.15
SNED1Q8TER0 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.85□□□□□ -1.15
SNED1Q8TER0 SLC25A14P1-201ENST00000502867 901 ntBASIC7.85□□□□□ -1.15
SNED1Q8TER0 MTND6P8-201ENST00000503471 522 ntBASIC7.85□□□□□ -1.15
SNED1Q8TER0 RNA5SP271-201ENST00000516700 88 ntBASIC7.85□□□□□ -1.15
SNED1Q8TER0 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.85□□□□□ -1.15
SNED1Q8TER0 BUB1P1-201ENST00000603541 607 ntBASIC7.85□□□□□ -1.15
SNED1Q8TER0 AP005431.1-201ENST00000618479 319 ntBASIC7.85□□□□□ -1.15
SNED1Q8TER0 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.85□□□□□ -1.15
SNED1Q8TER0 AL357153.4-201ENST00000620487 1016 ntBASIC7.85□□□□□ -1.15
SNED1Q8TER0 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
SNED1Q8TER0 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SNED1Q8TER0 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SNED1Q8TER0 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SNED1Q8TER0 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.84□□□□□ -1.15
SNED1Q8TER0 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SNED1Q8TER0 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SNED1Q8TER0 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SNED1Q8TER0 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.84□□□□□ -1.15
SNED1Q8TER0 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SNED1Q8TER0 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
SNED1Q8TER0 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SNED1Q8TER0 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.84□□□□□ -1.15
SNED1Q8TER0 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SNED1Q8TER0 RN7SKP121-201ENST00000410842 305 ntBASIC7.84□□□□□ -1.15
SNED1Q8TER0 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.84□□□□□ -1.15
SNED1Q8TER0 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.84□□□□□ -1.15
SNED1Q8TER0 AP000281.1-201ENST00000444036 316 ntBASIC7.84□□□□□ -1.15
SNED1Q8TER0 AC063943.2-201ENST00000495697 534 ntBASIC7.84□□□□□ -1.15
SNED1Q8TER0 RN7SKP238-201ENST00000516483 249 ntBASIC7.84□□□□□ -1.15
SNED1Q8TER0 IGHVIII-13-1-201ENST00000517613 291 ntBASIC7.84□□□□□ -1.15
SNED1Q8TER0 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.84□□□□□ -1.15
SNED1Q8TER0 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.84□□□□□ -1.15
SNED1Q8TER0 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.84□□□□□ -1.15
SNED1Q8TER0 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.84□□□□□ -1.15
SNED1Q8TER0 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.84□□□□□ -1.15
SNED1Q8TER0 MIR3176-201ENST00000582210 90 ntBASIC7.84□□□□□ -1.15
SNED1Q8TER0 AC073333.2-201ENST00000603589 769 ntBASIC7.84□□□□□ -1.15
SNED1Q8TER0 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.84□□□□□ -1.15
SNED1Q8TER0 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
SNED1Q8TER0 AC126175.1-201ENST00000617041 758 ntBASIC7.84□□□□□ -1.15
SNED1Q8TER0 AC129778.1-202ENST00000623812 261 ntBASIC7.84□□□□□ -1.15
SNED1Q8TER0 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.84□□□□□ -1.15
SNED1Q8TER0 AL591379.1-207ENST00000635982 261 ntBASIC7.84□□□□□ -1.15
SNED1Q8TER0 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.84□□□□□ -1.15
SNED1Q8TER0 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SNED1Q8TER0 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SNED1Q8TER0 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SNED1Q8TER0 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
SNED1Q8TER0 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SNED1Q8TER0 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SNED1Q8TER0 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SNED1Q8TER0 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SNED1Q8TER0 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
SNED1Q8TER0 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.83□□□□□ -1.16
SNED1Q8TER0 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.83□□□□□ -1.16
SNED1Q8TER0 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
SNED1Q8TER0 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.83□□□□□ -1.16
SNED1Q8TER0 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SNED1Q8TER0 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SNED1Q8TER0 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
SNED1Q8TER0 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
SNED1Q8TER0 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SNED1Q8TER0 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SNED1Q8TER0 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.83□□□□□ -1.16
SNED1Q8TER0 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
SNED1Q8TER0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
SNED1Q8TER0 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SNED1Q8TER0 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.83□□□□□ -1.16
SNED1Q8TER0 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
SNED1Q8TER0 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.83□□□□□ -1.16
SNED1Q8TER0 AC091390.2-201ENST00000432573 374 ntBASIC7.83□□□□□ -1.16
SNED1Q8TER0 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms