Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 EIF1AXP2-201ENST00000555940 413 ntBASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 RN7SL199P-201ENST00000578752 281 ntBASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 RN7SL656P-201ENST00000579044 281 ntBASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 RN7SL270P-201ENST00000579643 281 ntBASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 AL135999.3-201ENST00000610501 812 ntBASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 AL118556.2-201ENST00000614375 824 ntBASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 AC107905.1-201ENST00000616204 426 ntBASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 AC073488.9-201ENST00000631601 754 ntBASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 CASC19-212ENST00000641153 1287 ntBASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 AC078880.4-201ENST00000617627 1749 ntBASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.35□□□□□ -1.23
TRIM71Q2Q1W2 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 AC233968.1-201ENST00000611212 1300 ntBASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 AC020978.6-201ENST00000571197 3177 ntBASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 AC012213.2-201ENST00000562917 4597 ntBASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 YWHAZP4-201ENST00000392459 708 ntBASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 AC097523.2-201ENST00000435551 652 ntBASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 COX4I1P2-201ENST00000447446 547 ntBASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 Z83838.1-202ENST00000456225 839 ntBASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 RNU4-18P-201ENST00000516751 149 ntBASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 SMIM12P1-201ENST00000603004 274 ntBASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 AC004805.3-201ENST00000603178 310 ntBASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 AC093635.1-201ENST00000609028 555 ntBASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 RFC1-217ENST00000639695 867 ntTSL 5 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM71Q2Q1W2 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
TRIM71Q2Q1W2 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.34□□□□□ -1.24
TRIM71Q2Q1W2 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.24
TRIM71Q2Q1W2 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 MIR323B-201ENST00000385269 82 ntBASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 RPL5P5-201ENST00000392009 893 ntBASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 RPL5P34-201ENST00000426545 891 ntBASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 AC083862.1-201ENST00000427378 1242 ntBASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 KCTD9P1-201ENST00000430462 1167 ntBASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 RPL5P9-201ENST00000448118 886 ntBASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.33□□□□□ -1.24
TRIM71Q2Q1W2 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms