Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.41□□□□□ -1.54
LMO4P61968 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LMO4P61968 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
LMO4P61968 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LMO4P61968 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.41□□□□□ -1.54
LMO4P61968 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LMO4P61968 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
LMO4P61968 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LMO4P61968 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
LMO4P61968 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
LMO4P61968 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LMO4P61968 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LMO4P61968 AC092646.2-201ENST00000431242 2095 ntBASIC5.41□□□□□ -1.54
LMO4P61968 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC5.41□□□□□ -1.54
LMO4P61968 AC009237.3-203ENST00000442128 3551 ntBASIC5.41□□□□□ -1.54
LMO4P61968 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
LMO4P61968 ASNSP6-201ENST00000592770 1618 ntBASIC5.41□□□□□ -1.54
LMO4P61968 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LMO4P61968 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
LMO4P61968 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.4□□□□□ -1.54
LMO4P61968 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
LMO4P61968 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LMO4P61968 MTCO1P46-201ENST00000451639 1491 ntBASIC5.4□□□□□ -1.54
LMO4P61968 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LMO4P61968 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.4□□□□□ -1.54
LMO4P61968 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LMO4P61968 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
LMO4P61968 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
LMO4P61968 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC5.4□□□□□ -1.54
LMO4P61968 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LMO4P61968 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LMO4P61968 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LMO4P61968 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LMO4P61968 RNA5SP431-201ENST00000410312 120 ntBASIC5.4□□□□□ -1.54
LMO4P61968 AC096537.2-201ENST00000413707 714 ntBASIC5.4□□□□□ -1.54
LMO4P61968 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LMO4P61968 AC002127.1-201ENST00000421305 225 ntBASIC5.4□□□□□ -1.54
LMO4P61968 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LMO4P61968 AC108479.1-201ENST00000431142 427 ntBASIC5.4□□□□□ -1.54
LMO4P61968 MED28P4-201ENST00000433137 572 ntBASIC5.4□□□□□ -1.54
LMO4P61968 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LMO4P61968 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
LMO4P61968 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.4□□□□□ -1.54
LMO4P61968 OR13C1P-201ENST00000457612 963 ntBASIC5.4□□□□□ -1.54
LMO4P61968 RN7SL834P-201ENST00000461450 286 ntBASIC5.4□□□□□ -1.54
LMO4P61968 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.4□□□□□ -1.54
LMO4P61968 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.4□□□□□ -1.54
LMO4P61968 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.4□□□□□ -1.54
LMO4P61968 AC024451.1-201ENST00000508013 779 ntBASIC5.4□□□□□ -1.54
LMO4P61968 MAST4-IT1-201ENST00000514241 658 ntBASIC5.4□□□□□ -1.54
LMO4P61968 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC5.4□□□□□ -1.54
LMO4P61968 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.4□□□□□ -1.54
LMO4P61968 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC5.4□□□□□ -1.54
LMO4P61968 AC005363.1-201ENST00000530779 351 ntBASIC5.4□□□□□ -1.54
LMO4P61968 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.4□□□□□ -1.54
LMO4P61968 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.4□□□□□ -1.54
LMO4P61968 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.4□□□□□ -1.54
LMO4P61968 AC006512.2-201ENST00000543250 486 ntBASIC5.4□□□□□ -1.54
LMO4P61968 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.4□□□□□ -1.54
LMO4P61968 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.4□□□□□ -1.54
LMO4P61968 SETP3-201ENST00000581726 813 ntBASIC5.4□□□□□ -1.54
LMO4P61968 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.4□□□□□ -1.54
LMO4P61968 OR1N1-202ENST00000619659 939 ntBASIC5.4□□□□□ -1.54
LMO4P61968 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.4□□□□□ -1.54
LMO4P61968 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.4□□□□□ -1.54
LMO4P61968 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.4□□□□□ -1.54
LMO4P61968 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
LMO4P61968 HLF-210ENST00000575345 3589 ntTSL 2 BASIC5.4□□□□□ -1.55
LMO4P61968 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.4□□□□□ -1.55
LMO4P61968 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LMO4P61968 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LMO4P61968 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
LMO4P61968 AC007485.2-201ENST00000623493 1667 ntBASIC5.4□□□□□ -1.55
LMO4P61968 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LMO4P61968 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
LMO4P61968 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
LMO4P61968 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC5.4□□□□□ -1.55
LMO4P61968 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC5.4□□□□□ -1.55
LMO4P61968 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LMO4P61968 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LMO4P61968 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.39□□□□□ -1.55
LMO4P61968 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 MFSD8-217ENST00000641178 4374 ntBASIC5.39□□□□□ -1.55
LMO4P61968 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LMO4P61968 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
LMO4P61968 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
LMO4P61968 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMO4P61968 CASC19-246ENST00000641625 1606 ntBASIC5.39□□□□□ -1.55
LMO4P61968 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms