Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC013403.1-201ENST00000436954 263 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.01□□□□□ -1.29
HDAC4P56524 PMS2P9-201ENST00000441237 515 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.01□□□□□ -1.29
HDAC4P56524 PFN1P11-201ENST00000445829 389 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 AC009244.1-201ENST00000450566 258 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.01□□□□□ -1.29
HDAC4P56524 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.01□□□□□ -1.29
HDAC4P56524 TREML3P-201ENST00000457327 501 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 SULT1D1P-201ENST00000458020 882 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 RN7SL612P-201ENST00000497704 295 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.01□□□□□ -1.29
HDAC4P56524 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.01□□□□□ -1.29
HDAC4P56524 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.01□□□□□ -1.29
HDAC4P56524 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC7.01□□□□□ -1.29
HDAC4P56524 AC026774.2-201ENST00000513990 1098 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 SCARNA11.1-201ENST00000516918 132 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 AP005902.2-201ENST00000518393 307 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 SNRPCP6-201ENST00000528310 210 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.01□□□□□ -1.29
HDAC4P56524 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.01□□□□□ -1.29
HDAC4P56524 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.01□□□□□ -1.29
HDAC4P56524 OR7E19P-202ENST00000589942 844 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.01□□□□□ -1.29
HDAC4P56524 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 AC107308.1-201ENST00000615897 301 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.01□□□□□ -1.29
HDAC4P56524 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.01□□□□□ -1.29
HDAC4P56524 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
HDAC4P56524 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
HDAC4P56524 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.01□□□□□ -1.29
HDAC4P56524 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
HDAC4P56524 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.01□□□□□ -1.29
HDAC4P56524 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.01□□□□□ -1.29
HDAC4P56524 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HDAC4P56524 AC005618.1-201ENST00000606901 3148 ntBASIC7.01□□□□□ -1.29
HDAC4P56524 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HDAC4P56524 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
HDAC4P56524 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7□□□□□ -1.29
HDAC4P56524 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7□□□□□ -1.29
HDAC4P56524 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7□□□□□ -1.29
HDAC4P56524 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7□□□□□ -1.29
HDAC4P56524 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7□□□□□ -1.29
HDAC4P56524 AC092701.1-201ENST00000623627 1551 ntBASIC7□□□□□ -1.29
HDAC4P56524 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7□□□□□ -1.29
HDAC4P56524 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
HDAC4P56524 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7□□□□□ -1.29
HDAC4P56524 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HDAC4P56524 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7□□□□□ -1.29
HDAC4P56524 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7□□□□□ -1.29
HDAC4P56524 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7□□□□□ -1.29
HDAC4P56524 UBBP1-201ENST00000392399 473 ntBASIC7□□□□□ -1.29
HDAC4P56524 CCL7-202ENST00000394627 696 ntTSL 3 BASIC7□□□□□ -1.29
HDAC4P56524 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
HDAC4P56524 AC096537.2-201ENST00000413707 714 ntBASIC7□□□□□ -1.29
HDAC4P56524 AL713922.1-201ENST00000416477 747 ntBASIC7□□□□□ -1.29
HDAC4P56524 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC7□□□□□ -1.29
HDAC4P56524 EIF4A1P2-201ENST00000422633 1220 ntBASIC7□□□□□ -1.29
HDAC4P56524 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7□□□□□ -1.29
HDAC4P56524 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC7□□□□□ -1.29
HDAC4P56524 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7□□□□□ -1.29
HDAC4P56524 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7□□□□□ -1.29
HDAC4P56524 MTND4LP12-201ENST00000448237 295 ntBASIC7□□□□□ -1.29
HDAC4P56524 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7□□□□□ -1.29
HDAC4P56524 EIF3LP2-201ENST00000457262 807 ntBASIC7□□□□□ -1.29
HDAC4P56524 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC7□□□□□ -1.29
HDAC4P56524 AC093878.1-201ENST00000515630 432 ntBASIC7□□□□□ -1.29
HDAC4P56524 RNA5SP96-201ENST00000516041 107 ntBASIC7□□□□□ -1.29
HDAC4P56524 RNA5SP318-201ENST00000516352 92 ntBASIC7□□□□□ -1.29
HDAC4P56524 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7□□□□□ -1.29
HDAC4P56524 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7□□□□□ -1.29
HDAC4P56524 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7□□□□□ -1.29
HDAC4P56524 AC007068.2-201ENST00000543168 395 ntBASIC7□□□□□ -1.29
HDAC4P56524 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC7□□□□□ -1.29
HDAC4P56524 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7□□□□□ -1.29
HDAC4P56524 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC7□□□□□ -1.29
HDAC4P56524 AC093524.1-201ENST00000564266 1094 ntBASIC7□□□□□ -1.29
HDAC4P56524 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC7□□□□□ -1.29
HDAC4P56524 RN7SL32P-201ENST00000580514 281 ntBASIC7□□□□□ -1.29
HDAC4P56524 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7□□□□□ -1.29
HDAC4P56524 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7□□□□□ -1.29
HDAC4P56524 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7□□□□□ -1.29
HDAC4P56524 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7□□□□□ -1.29
HDAC4P56524 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
HDAC4P56524 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7□□□□□ -1.29
HDAC4P56524 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
HDAC4P56524 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
HDAC4P56524 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7□□□□□ -1.29
HDAC4P56524 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7□□□□□ -1.29
HDAC4P56524 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.99□□□□□ -1.29
HDAC4P56524 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.99□□□□□ -1.29
HDAC4P56524 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HDAC4P56524 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HDAC4P56524 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms