Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 HMGB3P14-201ENST00000494195 599 ntBASIC6.44□□□□□ -1.38
CDH13P55290 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH13P55290 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.44□□□□□ -1.38
CDH13P55290 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH13P55290 AC010442.1-201ENST00000515583 816 ntBASIC6.44□□□□□ -1.38
CDH13P55290 CARSP2-201ENST00000520688 277 ntBASIC6.44□□□□□ -1.38
CDH13P55290 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.44□□□□□ -1.38
CDH13P55290 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH13P55290 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.44□□□□□ -1.38
CDH13P55290 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CDH13P55290 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH13P55290 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH13P55290 BUB1P1-201ENST00000603541 607 ntBASIC6.44□□□□□ -1.38
CDH13P55290 AC091193.1-201ENST00000604640 448 ntBASIC6.44□□□□□ -1.38
CDH13P55290 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.44□□□□□ -1.38
CDH13P55290 PTCHD3P1-201ENST00000612350 537 ntBASIC6.44□□□□□ -1.38
CDH13P55290 MRPL57P3-201ENST00000619218 176 ntBASIC6.44□□□□□ -1.38
CDH13P55290 AP001885.1-201ENST00000621658 558 ntBASIC6.44□□□□□ -1.38
CDH13P55290 AC005858.3-201ENST00000624756 589 ntBASIC6.44□□□□□ -1.38
CDH13P55290 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH13P55290 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH13P55290 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH13P55290 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH13P55290 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH13P55290 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH13P55290 AC023245.2-201ENST00000530760 2978 ntBASIC6.44□□□□□ -1.38
CDH13P55290 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH13P55290 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.44□□□□□ -1.38
CDH13P55290 MAPK10-357ENST00000641831 2858 ntBASIC6.43□□□□□ -1.38
CDH13P55290 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH13P55290 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH13P55290 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH13P55290 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH13P55290 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH13P55290 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH13P55290 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH13P55290 STAG3L4-201ENST00000352103 530 ntBASIC6.43□□□□□ -1.38
CDH13P55290 RN7SKP118-201ENST00000364331 330 ntBASIC6.43□□□□□ -1.38
CDH13P55290 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.43□□□□□ -1.38
CDH13P55290 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.43□□□□□ -1.38
CDH13P55290 ETF1P1-206ENST00000427296 984 ntBASIC6.43□□□□□ -1.38
CDH13P55290 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.43□□□□□ -1.38
CDH13P55290 RPL26P30-201ENST00000453533 435 ntBASIC6.43□□□□□ -1.38
CDH13P55290 SCDP1-201ENST00000455244 1081 ntBASIC6.43□□□□□ -1.38
CDH13P55290 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.43□□□□□ -1.38
CDH13P55290 UOX-201ENST00000471089 899 ntBASIC6.43□□□□□ -1.38
CDH13P55290 RPL21P42-201ENST00000488408 464 ntBASIC6.43□□□□□ -1.38
CDH13P55290 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 OR52H2P-201ENST00000514607 902 ntBASIC6.43□□□□□ -1.38
CDH13P55290 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.43□□□□□ -1.38
CDH13P55290 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH13P55290 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH13P55290 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH13P55290 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH13P55290 AC091932.1-201ENST00000569381 427 ntBASIC6.43□□□□□ -1.38
CDH13P55290 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.43□□□□□ -1.38
CDH13P55290 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 AL031429.2-201ENST00000602605 649 ntBASIC6.43□□□□□ -1.38
CDH13P55290 AL078623.1-201ENST00000602702 907 ntBASIC6.43□□□□□ -1.38
CDH13P55290 AC099777.1-201ENST00000603779 1070 ntBASIC6.43□□□□□ -1.38
CDH13P55290 AC005277.2-201ENST00000617898 390 ntBASIC6.43□□□□□ -1.38
CDH13P55290 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH13P55290 AC012254.5-201ENST00000623573 478 ntBASIC6.43□□□□□ -1.38
CDH13P55290 AC018692.2-201ENST00000624130 348 ntBASIC6.43□□□□□ -1.38
CDH13P55290 AC061999.1-201ENST00000624454 177 ntBASIC6.43□□□□□ -1.38
CDH13P55290 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH13P55290 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.43□□□□□ -1.38
CDH13P55290 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH13P55290 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CDH13P55290 NEK2P2-201ENST00000438441 1338 ntBASIC6.43□□□□□ -1.38
CDH13P55290 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.43□□□□□ -1.38
CDH13P55290 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH13P55290 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH13P55290 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.43□□□□□ -1.38
CDH13P55290 AC093844.1-201ENST00000514910 1361 ntBASIC6.43□□□□□ -1.38
CDH13P55290 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH13P55290 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDH13P55290 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH13P55290 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH13P55290 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH13P55290 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH13P55290 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH13P55290 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH13P55290 RN7SKP130-201ENST00000364924 301 ntBASIC6.42□□□□□ -1.38
CDH13P55290 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.42□□□□□ -1.38
CDH13P55290 UBBP1-201ENST00000392399 473 ntBASIC6.42□□□□□ -1.38
CDH13P55290 MICG-208ENST00000416822 132 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms