Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC11.29□□□□□ -0.6
SMARCA4P51532 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMARCA4P51532 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SMARCA4P51532 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMARCA4P51532 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMARCA4P51532 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMARCA4P51532 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SMARCA4P51532 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMARCA4P51532 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMARCA4P51532 AL512593.1-201ENST00000444758 779 ntBASIC11.28□□□□□ -0.6
SMARCA4P51532 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC11.28□□□□□ -0.6
SMARCA4P51532 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC11.28□□□□□ -0.6
SMARCA4P51532 AC004948.1-201ENST00000609858 672 ntBASIC11.28□□□□□ -0.6
SMARCA4P51532 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMARCA4P51532 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC11.28□□□□□ -0.6
SMARCA4P51532 AC011447.6-201ENST00000623510 2598 ntBASIC11.28□□□□□ -0.6
SMARCA4P51532 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMARCA4P51532 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMARCA4P51532 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMARCA4P51532 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
SMARCA4P51532 AL139384.2-201ENST00000613809 3590 ntBASIC11.28□□□□□ -0.6
SMARCA4P51532 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SMARCA4P51532 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
SMARCA4P51532 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC11.28□□□□□ -0.6
SMARCA4P51532 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMARCA4P51532 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SMARCA4P51532 AC245096.1-201ENST00000413104 546 ntBASIC11.27□□□□□ -0.6
SMARCA4P51532 AL035660.1-201ENST00000422041 222 ntBASIC11.27□□□□□ -0.6
SMARCA4P51532 AL355433.1-201ENST00000422804 300 ntBASIC11.27□□□□□ -0.6
SMARCA4P51532 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC11.27□□□□□ -0.6
SMARCA4P51532 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SMARCA4P51532 IGLV3-6-201ENST00000523937 250 ntBASIC11.27□□□□□ -0.6
SMARCA4P51532 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC11.27□□□□□ -0.6
SMARCA4P51532 MIR4700-201ENST00000578311 74 ntBASIC11.27□□□□□ -0.6
SMARCA4P51532 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC11.27□□□□□ -0.6
SMARCA4P51532 AC104695.2-201ENST00000605056 775 ntBASIC11.27□□□□□ -0.6
SMARCA4P51532 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
SMARCA4P51532 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SMARCA4P51532 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC11.27□□□□□ -0.6
SMARCA4P51532 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC11.27□□□□□ -0.6
SMARCA4P51532 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
SMARCA4P51532 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMARCA4P51532 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMARCA4P51532 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SMARCA4P51532 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC11.27□□□□□ -0.61
SMARCA4P51532 AC010624.4-201ENST00000597606 1351 ntBASIC11.27□□□□□ -0.61
SMARCA4P51532 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMARCA4P51532 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC11.27□□□□□ -0.61
SMARCA4P51532 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMARCA4P51532 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMARCA4P51532 AC106872.5-201ENST00000508856 1416 ntBASIC11.27□□□□□ -0.61
SMARCA4P51532 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMARCA4P51532 OR3A2-201ENST00000408891 1076 ntBASIC11.27□□□□□ -0.61
SMARCA4P51532 GAS5-202ENST00000414075 413 ntTSL 2 BASIC11.27□□□□□ -0.61
SMARCA4P51532 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC11.27□□□□□ -0.61
SMARCA4P51532 RPSAP37-201ENST00000470913 821 ntBASIC11.27□□□□□ -0.61
SMARCA4P51532 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC11.27□□□□□ -0.61
SMARCA4P51532 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMARCA4P51532 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC11.27□□□□□ -0.61
SMARCA4P51532 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC11.27□□□□□ -0.61
SMARCA4P51532 AP004607.6-201ENST00000525033 1202 ntBASIC11.27□□□□□ -0.61
SMARCA4P51532 MYL6-213ENST00000549017 502 ntTSL 3 BASIC11.27□□□□□ -0.61
SMARCA4P51532 AC027229.1-201ENST00000583887 253 ntBASIC11.27□□□□□ -0.61
SMARCA4P51532 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC11.27□□□□□ -0.61
SMARCA4P51532 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMARCA4P51532 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SMARCA4P51532 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
SMARCA4P51532 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC11.26□□□□□ -0.61
SMARCA4P51532 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SMARCA4P51532 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMARCA4P51532 FUNDC2P3-201ENST00000334716 533 ntBASIC11.26□□□□□ -0.61
SMARCA4P51532 RPL35AP3-201ENST00000414680 288 ntBASIC11.26□□□□□ -0.61
SMARCA4P51532 AC127526.2-201ENST00000426436 775 ntBASIC11.26□□□□□ -0.61
SMARCA4P51532 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC11.26□□□□□ -0.61
SMARCA4P51532 VN1R110P-201ENST00000438988 971 ntBASIC11.26□□□□□ -0.61
SMARCA4P51532 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC11.26□□□□□ -0.61
SMARCA4P51532 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC11.26□□□□□ -0.61
SMARCA4P51532 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC11.26□□□□□ -0.61
SMARCA4P51532 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC11.26□□□□□ -0.61
SMARCA4P51532 ATG10-208ENST00000513634 618 ntTSL 2 BASIC11.26□□□□□ -0.61
SMARCA4P51532 Y_RNA.710-201ENST00000516975 110 ntBASIC11.26□□□□□ -0.61
SMARCA4P51532 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC11.26□□□□□ -0.61
SMARCA4P51532 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC11.26□□□□□ -0.61
SMARCA4P51532 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
SMARCA4P51532 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC11.26□□□□□ -0.61
SMARCA4P51532 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMARCA4P51532 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SMARCA4P51532 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMARCA4P51532 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMARCA4P51532 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMARCA4P51532 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
SMARCA4P51532 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMARCA4P51532 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMARCA4P51532 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMARCA4P51532 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMARCA4P51532 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
SMARCA4P51532 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SMARCA4P51532 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC11.25□□□□□ -0.61
SMARCA4P51532 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMARCA4P51532 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms