Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC018645.1-201ENST00000505003 109 ntBASIC7.43□□□□□ -1.22
CIITAP33076 AC131392.1-201ENST00000506490 633 ntBASIC7.43□□□□□ -1.22
CIITAP33076 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.43□□□□□ -1.22
CIITAP33076 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC7.43□□□□□ -1.22
CIITAP33076 AP000662.1-201ENST00000530952 487 ntBASIC7.43□□□□□ -1.22
CIITAP33076 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.43□□□□□ -1.22
CIITAP33076 BTG1P1-201ENST00000540396 508 ntBASIC7.43□□□□□ -1.22
CIITAP33076 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.43□□□□□ -1.22
CIITAP33076 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CIITAP33076 RN7SL208P-201ENST00000577964 296 ntBASIC7.43□□□□□ -1.22
CIITAP33076 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.43□□□□□ -1.22
CIITAP33076 AL132796.3-201ENST00000624703 900 ntBASIC7.43□□□□□ -1.22
CIITAP33076 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CIITAP33076 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CIITAP33076 AC062022.1-201ENST00000451026 1684 ntBASIC7.43□□□□□ -1.22
CIITAP33076 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CIITAP33076 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CIITAP33076 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CIITAP33076 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CIITAP33076 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CIITAP33076 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CIITAP33076 FO082842.1-201ENST00000423552 1370 ntBASIC7.43□□□□□ -1.22
CIITAP33076 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CIITAP33076 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CIITAP33076 AL133243.4-201ENST00000623116 3109 ntBASIC7.43□□□□□ -1.22
CIITAP33076 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CIITAP33076 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CIITAP33076 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CIITAP33076 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CIITAP33076 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CIITAP33076 CASC19-228ENST00000641414 1684 ntBASIC7.42□□□□□ -1.22
CIITAP33076 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.42□□□□□ -1.22
CIITAP33076 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CIITAP33076 RNU1-84P-201ENST00000365447 164 ntBASIC7.42□□□□□ -1.22
CIITAP33076 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CIITAP33076 RNU1-46P-201ENST00000384425 164 ntBASIC7.42□□□□□ -1.22
CIITAP33076 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC7.42□□□□□ -1.22
CIITAP33076 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC7.42□□□□□ -1.22
CIITAP33076 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.42□□□□□ -1.22
CIITAP33076 RPL23AP85-201ENST00000421838 433 ntBASIC7.42□□□□□ -1.22
CIITAP33076 Z68868.1-201ENST00000429048 544 ntBASIC7.42□□□□□ -1.22
CIITAP33076 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.42□□□□□ -1.22
CIITAP33076 AL645939.3-201ENST00000435408 225 ntBASIC7.42□□□□□ -1.22
CIITAP33076 AC092601.1-201ENST00000444526 383 ntBASIC7.42□□□□□ -1.22
CIITAP33076 RBMY2HP-201ENST00000457961 720 ntBASIC7.42□□□□□ -1.22
CIITAP33076 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC7.42□□□□□ -1.22
CIITAP33076 AL133399.1-201ENST00000527476 298 ntBASIC7.42□□□□□ -1.22
CIITAP33076 RPL3P13-201ENST00000550415 216 ntBASIC7.42□□□□□ -1.22
CIITAP33076 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CIITAP33076 AC133552.4-201ENST00000576103 676 ntBASIC7.42□□□□□ -1.22
CIITAP33076 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.42□□□□□ -1.22
CIITAP33076 AC139493.1-201ENST00000604368 397 ntBASIC7.42□□□□□ -1.22
CIITAP33076 AC016252.1-201ENST00000609721 474 ntBASIC7.42□□□□□ -1.22
CIITAP33076 SNX18P10-201ENST00000625014 519 ntBASIC7.42□□□□□ -1.22
CIITAP33076 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.42□□□□□ -1.22
CIITAP33076 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CIITAP33076 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CIITAP33076 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CIITAP33076 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CIITAP33076 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CIITAP33076 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CIITAP33076 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
CIITAP33076 AL139384.2-201ENST00000613809 3590 ntBASIC7.42□□□□□ -1.22
CIITAP33076 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.42□□□□□ -1.22
CIITAP33076 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
CIITAP33076 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CIITAP33076 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CIITAP33076 AC092821.3-202ENST00000641304 2767 ntBASIC7.42□□□□□ -1.22
CIITAP33076 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.42□□□□□ -1.22
CIITAP33076 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CIITAP33076 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CIITAP33076 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CIITAP33076 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CIITAP33076 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CIITAP33076 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.41□□□□□ -1.22
CIITAP33076 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CIITAP33076 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.41□□□□□ -1.22
CIITAP33076 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CIITAP33076 AC127070.3-201ENST00000503695 3263 ntBASIC7.41□□□□□ -1.22
CIITAP33076 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.41□□□□□ -1.22
CIITAP33076 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CIITAP33076 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CIITAP33076 MIR191-201ENST00000384873 92 ntBASIC7.41□□□□□ -1.22
CIITAP33076 RN7SKP221-201ENST00000410420 301 ntBASIC7.41□□□□□ -1.22
CIITAP33076 RN7SKP38-201ENST00000410782 309 ntBASIC7.41□□□□□ -1.22
CIITAP33076 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.41□□□□□ -1.22
CIITAP33076 PMS2P9-201ENST00000441237 515 ntBASIC7.41□□□□□ -1.22
CIITAP33076 AC011742.2-201ENST00000443818 352 ntBASIC7.41□□□□□ -1.22
CIITAP33076 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.41□□□□□ -1.22
CIITAP33076 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.41□□□□□ -1.22
CIITAP33076 RPS7P10-201ENST00000464254 603 ntBASIC7.41□□□□□ -1.22
CIITAP33076 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.41□□□□□ -1.22
CIITAP33076 AC092349.1-201ENST00000504903 310 ntBASIC7.41□□□□□ -1.22
CIITAP33076 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.41□□□□□ -1.22
CIITAP33076 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.41□□□□□ -1.22
CIITAP33076 TDGP1-201ENST00000543961 1229 ntBASIC7.41□□□□□ -1.22
CIITAP33076 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.41□□□□□ -1.22
CIITAP33076 BMS1P16-201ENST00000556075 1147 ntBASIC7.41□□□□□ -1.22
CIITAP33076 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.41□□□□□ -1.22
CIITAP33076 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms