Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 MFSD8-218ENST00000641186 4448 ntBASIC7.6□□□□□ -1.19
COL4A5P29400 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.6□□□□□ -1.19
COL4A5P29400 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.6□□□□□ -1.19
COL4A5P29400 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
COL4A5P29400 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
COL4A5P29400 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.6□□□□□ -1.19
COL4A5P29400 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.6□□□□□ -1.19
COL4A5P29400 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.6□□□□□ -1.19
COL4A5P29400 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.6□□□□□ -1.19
COL4A5P29400 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.6□□□□□ -1.19
COL4A5P29400 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.6□□□□□ -1.19
COL4A5P29400 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.6□□□□□ -1.19
COL4A5P29400 AL136038.1-201ENST00000497246 351 ntBASIC7.6□□□□□ -1.19
COL4A5P29400 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.6□□□□□ -1.19
COL4A5P29400 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.6□□□□□ -1.19
COL4A5P29400 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.6□□□□□ -1.19
COL4A5P29400 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.6□□□□□ -1.19
COL4A5P29400 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.6□□□□□ -1.19
COL4A5P29400 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.6□□□□□ -1.19
COL4A5P29400 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 AL008723.3-201ENST00000608926 449 ntBASIC7.6□□□□□ -1.19
COL4A5P29400 AC239803.2-201ENST00000610161 430 ntBASIC7.6□□□□□ -1.19
COL4A5P29400 AC245014.3-201ENST00000618589 347 ntBASIC7.6□□□□□ -1.19
COL4A5P29400 AC018445.2-201ENST00000622987 260 ntBASIC7.6□□□□□ -1.19
COL4A5P29400 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL4A5P29400 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.6□□□□□ -1.19
COL4A5P29400 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC7.59□□□□□ -1.19
COL4A5P29400 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL4A5P29400 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.59□□□□□ -1.19
COL4A5P29400 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL4A5P29400 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL4A5P29400 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL4A5P29400 MAPK10-377ENST00000642006 2752 ntBASIC7.59□□□□□ -1.19
COL4A5P29400 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.19
COL4A5P29400 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL4A5P29400 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC7.59□□□□□ -1.19
COL4A5P29400 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL4A5P29400 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.59□□□□□ -1.19
COL4A5P29400 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
COL4A5P29400 AC245060.4-201ENST00000413293 1121 ntBASIC7.59□□□□□ -1.19
COL4A5P29400 AC093155.2-201ENST00000420734 937 ntBASIC7.59□□□□□ -1.19
COL4A5P29400 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.59□□□□□ -1.19
COL4A5P29400 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.59□□□□□ -1.19
COL4A5P29400 AL512593.1-201ENST00000444758 779 ntBASIC7.59□□□□□ -1.19
COL4A5P29400 UBA52P7-201ENST00000486088 380 ntBASIC7.59□□□□□ -1.19
COL4A5P29400 COX6B1P2-201ENST00000489624 230 ntBASIC7.59□□□□□ -1.19
COL4A5P29400 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.59□□□□□ -1.19
COL4A5P29400 AP006245.2-201ENST00000522004 300 ntBASIC7.59□□□□□ -1.19
COL4A5P29400 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL4A5P29400 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.59□□□□□ -1.19
COL4A5P29400 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.59□□□□□ -1.19
COL4A5P29400 AC025171.4-201ENST00000607250 1047 ntBASIC7.59□□□□□ -1.19
COL4A5P29400 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.59□□□□□ -1.19
COL4A5P29400 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.59□□□□□ -1.19
COL4A5P29400 NEK2P4-201ENST00000425793 1329 ntBASIC7.59□□□□□ -1.19
COL4A5P29400 AL512310.3-201ENST00000547023 1335 ntBASIC7.59□□□□□ -1.19
COL4A5P29400 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL4A5P29400 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL4A5P29400 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL4A5P29400 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC7.59□□□□□ -1.19
COL4A5P29400 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL4A5P29400 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL4A5P29400 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL4A5P29400 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
COL4A5P29400 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
COL4A5P29400 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
COL4A5P29400 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
COL4A5P29400 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.2
COL4A5P29400 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.59□□□□□ -1.2
COL4A5P29400 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
COL4A5P29400 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL4A5P29400 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
COL4A5P29400 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
COL4A5P29400 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL4A5P29400 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
COL4A5P29400 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL4A5P29400 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
COL4A5P29400 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.58□□□□□ -1.2
COL4A5P29400 RPS14P4-201ENST00000415880 418 ntBASIC7.58□□□□□ -1.2
COL4A5P29400 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.58□□□□□ -1.2
COL4A5P29400 AL121776.1-201ENST00000429337 372 ntBASIC7.58□□□□□ -1.2
COL4A5P29400 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
COL4A5P29400 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.58□□□□□ -1.2
COL4A5P29400 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.58□□□□□ -1.2
COL4A5P29400 AC027026.1-201ENST00000532323 742 ntBASIC7.58□□□□□ -1.2
COL4A5P29400 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.58□□□□□ -1.2
COL4A5P29400 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.58□□□□□ -1.2
COL4A5P29400 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL4A5P29400 SDR42E1P1-201ENST00000611327 477 ntBASIC7.58□□□□□ -1.2
COL4A5P29400 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms