Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RPL26P30-201ENST00000453533 435 ntBASIC8.96□□□□□ -0.98
RXRBP28702 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC8.96□□□□□ -0.98
RXRBP28702 MTND2P6-201ENST00000455337 1030 ntBASIC8.96□□□□□ -0.98
RXRBP28702 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC8.96□□□□□ -0.98
RXRBP28702 AP005202.1-201ENST00000489915 867 ntBASIC8.96□□□□□ -0.98
RXRBP28702 AC021146.11-201ENST00000503319 491 ntBASIC8.96□□□□□ -0.98
RXRBP28702 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC8.96□□□□□ -0.98
RXRBP28702 SNX18P24-201ENST00000505249 671 ntBASIC8.96□□□□□ -0.98
RXRBP28702 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.96□□□□□ -0.98
RXRBP28702 MTCO3P28-201ENST00000513351 515 ntBASIC8.96□□□□□ -0.98
RXRBP28702 MTND2P32-201ENST00000521584 1038 ntBASIC8.96□□□□□ -0.98
RXRBP28702 OR4C7P-201ENST00000533375 919 ntBASIC8.96□□□□□ -0.98
RXRBP28702 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC8.96□□□□□ -0.98
RXRBP28702 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC8.96□□□□□ -0.98
RXRBP28702 ACTG1P15-201ENST00000570019 1063 ntBASIC8.96□□□□□ -0.98
RXRBP28702 RN7SL339P-201ENST00000580597 296 ntBASIC8.96□□□□□ -0.98
RXRBP28702 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC8.96□□□□□ -0.98
RXRBP28702 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
RXRBP28702 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.96□□□□□ -0.98
RXRBP28702 AL390882.1-201ENST00000618821 594 ntBASIC8.96□□□□□ -0.98
RXRBP28702 AC018445.2-201ENST00000622987 260 ntBASIC8.96□□□□□ -0.98
RXRBP28702 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC8.96□□□□□ -0.98
RXRBP28702 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC8.96□□□□□ -0.98
RXRBP28702 AKAP2-201ENST00000259318 3101 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
RXRBP28702 VN2R1P-201ENST00000449668 1743 ntBASIC8.96□□□□□ -0.98
RXRBP28702 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
RXRBP28702 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
RXRBP28702 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC8.96□□□□□ -0.98
RXRBP28702 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
RXRBP28702 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
RXRBP28702 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.96□□□□□ -0.98
RXRBP28702 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.96□□□□□ -0.98
RXRBP28702 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
RXRBP28702 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
RXRBP28702 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC8.95□□□□□ -0.98
RXRBP28702 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
RXRBP28702 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.95□□□□□ -0.98
RXRBP28702 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RXRBP28702 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC8.95□□□□□ -0.98
RXRBP28702 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RXRBP28702 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RXRBP28702 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
RXRBP28702 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.95□□□□□ -0.98
RXRBP28702 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.95□□□□□ -0.98
RXRBP28702 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RXRBP28702 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC8.95□□□□□ -0.98
RXRBP28702 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC8.95□□□□□ -0.98
RXRBP28702 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC8.95□□□□□ -0.98
RXRBP28702 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RXRBP28702 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC8.95□□□□□ -0.98
RXRBP28702 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RXRBP28702 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
RXRBP28702 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
RXRBP28702 MIR143-201ENST00000385300 106 ntBASIC8.95□□□□□ -0.98
RXRBP28702 CCNB2P1-201ENST00000399411 1150 ntBASIC8.95□□□□□ -0.98
RXRBP28702 AL359694.1-201ENST00000403247 604 ntBASIC8.95□□□□□ -0.98
RXRBP28702 AP000534.2-201ENST00000412729 568 ntBASIC8.95□□□□□ -0.98
RXRBP28702 RAC1P4-201ENST00000419413 579 ntBASIC8.95□□□□□ -0.98
RXRBP28702 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
RXRBP28702 H2AFZP6-201ENST00000444403 394 ntBASIC8.95□□□□□ -0.98
RXRBP28702 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC8.95□□□□□ -0.98
RXRBP28702 AC013399.1-201ENST00000450311 418 ntBASIC8.95□□□□□ -0.98
RXRBP28702 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC8.95□□□□□ -0.98
RXRBP28702 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC8.95□□□□□ -0.98
RXRBP28702 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC8.95□□□□□ -0.98
RXRBP28702 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RXRBP28702 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RXRBP28702 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC8.95□□□□□ -0.98
RXRBP28702 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC8.95□□□□□ -0.98
RXRBP28702 OR5H7P-201ENST00000514084 930 ntBASIC8.95□□□□□ -0.98
RXRBP28702 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC8.95□□□□□ -0.98
RXRBP28702 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC8.95□□□□□ -0.98
RXRBP28702 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC8.95□□□□□ -0.98
RXRBP28702 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC8.95□□□□□ -0.98
RXRBP28702 AC004908.1-201ENST00000606572 541 ntBASIC8.95□□□□□ -0.98
RXRBP28702 AP000864.1-201ENST00000609424 650 ntBASIC8.95□□□□□ -0.98
RXRBP28702 AL352984.2-201ENST00000611153 546 ntBASIC8.95□□□□□ -0.98
RXRBP28702 AC009464.1-201ENST00000615731 469 ntBASIC8.95□□□□□ -0.98
RXRBP28702 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
RXRBP28702 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.95□□□□□ -0.98
RXRBP28702 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RXRBP28702 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC8.95□□□□□ -0.98
RXRBP28702 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC8.95□□□□□ -0.98
RXRBP28702 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.95□□□□□ -0.98
RXRBP28702 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.95□□□□□ -0.98
RXRBP28702 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
RXRBP28702 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
RXRBP28702 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.95□□□□□ -0.98
RXRBP28702 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RXRBP28702 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RXRBP28702 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RXRBP28702 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
RXRBP28702 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RXRBP28702 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RXRBP28702 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC8.94□□□□□ -0.98
RXRBP28702 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
RXRBP28702 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
RXRBP28702 RN7SKP292-201ENST00000365522 317 ntBASIC8.94□□□□□ -0.98
RXRBP28702 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
RXRBP28702 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms