Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
COL5A3P25940 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.95□□□□□ -1.14
COL5A3P25940 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.95□□□□□ -1.14
COL5A3P25940 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A3P25940 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A3P25940 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
COL5A3P25940 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
COL5A3P25940 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
COL5A3P25940 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.95□□□□□ -1.14
COL5A3P25940 MIR541-201ENST00000401360 84 ntBASIC7.95□□□□□ -1.14
COL5A3P25940 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.95□□□□□ -1.14
COL5A3P25940 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.95□□□□□ -1.14
COL5A3P25940 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC7.95□□□□□ -1.14
COL5A3P25940 Y_RNA.710-201ENST00000516975 110 ntBASIC7.95□□□□□ -1.14
COL5A3P25940 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.95□□□□□ -1.14
COL5A3P25940 AC135626.1-201ENST00000556983 435 ntBASIC7.95□□□□□ -1.14
COL5A3P25940 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.95□□□□□ -1.14
COL5A3P25940 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A3P25940 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.95□□□□□ -1.14
COL5A3P25940 AP005119.1-201ENST00000580956 292 ntBASIC7.95□□□□□ -1.14
COL5A3P25940 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.95□□□□□ -1.14
COL5A3P25940 AC127024.6-201ENST00000621598 424 ntBASIC7.95□□□□□ -1.14
COL5A3P25940 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A3P25940 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.95□□□□□ -1.14
COL5A3P25940 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
COL5A3P25940 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.94□□□□□ -1.14
COL5A3P25940 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A3P25940 EDA-213ENST00000616899 4643 ntTSL 5 BASIC7.94□□□□□ -1.14
COL5A3P25940 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.94□□□□□ -1.14
COL5A3P25940 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
COL5A3P25940 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A3P25940 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.94□□□□□ -1.14
COL5A3P25940 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A3P25940 AC062022.1-201ENST00000451026 1684 ntBASIC7.94□□□□□ -1.14
COL5A3P25940 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A3P25940 SNORA43.1-201ENST00000364863 140 ntBASIC7.94□□□□□ -1.14
COL5A3P25940 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
COL5A3P25940 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
COL5A3P25940 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.94□□□□□ -1.14
COL5A3P25940 RN7SL515P-201ENST00000463999 297 ntBASIC7.94□□□□□ -1.14
COL5A3P25940 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.94□□□□□ -1.14
COL5A3P25940 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.94□□□□□ -1.14
COL5A3P25940 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.94□□□□□ -1.14
COL5A3P25940 SETP21-201ENST00000514799 892 ntBASIC7.94□□□□□ -1.14
COL5A3P25940 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
COL5A3P25940 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.94□□□□□ -1.14
COL5A3P25940 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A3P25940 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A3P25940 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A3P25940 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
COL5A3P25940 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A3P25940 SHQ1P1-201ENST00000437111 1544 ntBASIC7.93□□□□□ -1.14
COL5A3P25940 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC7.93□□□□□ -1.14
COL5A3P25940 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.93□□□□□ -1.14
COL5A3P25940 CLCA3P-203ENST00000490028 2781 ntBASIC7.93□□□□□ -1.14
COL5A3P25940 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A3P25940 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A3P25940 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
COL5A3P25940 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
COL5A3P25940 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A3P25940 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A3P25940 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A3P25940 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.93□□□□□ -1.14
COL5A3P25940 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.93□□□□□ -1.14
COL5A3P25940 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.93□□□□□ -1.14
COL5A3P25940 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.93□□□□□ -1.14
COL5A3P25940 ACA64.1-201ENST00000459171 127 ntBASIC7.93□□□□□ -1.14
COL5A3P25940 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.93□□□□□ -1.14
COL5A3P25940 RPS4XP14-201ENST00000493072 781 ntBASIC7.93□□□□□ -1.14
COL5A3P25940 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.93□□□□□ -1.14
COL5A3P25940 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.93□□□□□ -1.14
COL5A3P25940 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.93□□□□□ -1.14
COL5A3P25940 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.93□□□□□ -1.14
COL5A3P25940 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.93□□□□□ -1.14
COL5A3P25940 ZNF322P1-201ENST00000568013 1209 ntBASIC7.93□□□□□ -1.14
COL5A3P25940 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.93□□□□□ -1.14
COL5A3P25940 MIR6719-201ENST00000622428 87 ntBASIC7.93□□□□□ -1.14
COL5A3P25940 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.93□□□□□ -1.14
COL5A3P25940 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A3P25940 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
COL5A3P25940 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
COL5A3P25940 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A3P25940 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A3P25940 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.93□□□□□ -1.14
COL5A3P25940 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.93□□□□□ -1.14
COL5A3P25940 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A3P25940 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
COL5A3P25940 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
COL5A3P25940 CR788268.1-201ENST00000603931 1809 ntBASIC7.93□□□□□ -1.14
COL5A3P25940 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A3P25940 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
COL5A3P25940 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A3P25940 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.92□□□□□ -1.14
COL5A3P25940 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
COL5A3P25940 OR11H13P-201ENST00000359695 979 ntBASIC7.92□□□□□ -1.14
COL5A3P25940 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.92□□□□□ -1.14
COL5A3P25940 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.92□□□□□ -1.14
COL5A3P25940 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.92□□□□□ -1.14
COL5A3P25940 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.92□□□□□ -1.14
COL5A3P25940 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms