Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC8.46□□□□□ -1.06
ERCC3P19447 CYCSP44-201ENST00000448560 313 ntBASIC8.46□□□□□ -1.06
ERCC3P19447 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
ERCC3P19447 ST13P21-201ENST00000453250 1098 ntBASIC8.46□□□□□ -1.06
ERCC3P19447 RPL12P40-201ENST00000467028 488 ntBASIC8.46□□□□□ -1.06
ERCC3P19447 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC8.46□□□□□ -1.06
ERCC3P19447 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC8.46□□□□□ -1.06
ERCC3P19447 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC8.46□□□□□ -1.06
ERCC3P19447 AC091163.3-201ENST00000518269 1144 ntBASIC8.46□□□□□ -1.06
ERCC3P19447 RPS20-202ENST00000518875 671 ntTSL 2 BASIC8.46□□□□□ -1.06
ERCC3P19447 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC8.46□□□□□ -1.06
ERCC3P19447 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC8.46□□□□□ -1.06
ERCC3P19447 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC8.46□□□□□ -1.06
ERCC3P19447 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC8.46□□□□□ -1.06
ERCC3P19447 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC8.46□□□□□ -1.06
ERCC3P19447 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC8.46□□□□□ -1.06
ERCC3P19447 RPS7P1-201ENST00000571702 585 ntBASIC8.46□□□□□ -1.06
ERCC3P19447 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC8.46□□□□□ -1.06
ERCC3P19447 MIR4437-201ENST00000581331 60 ntBASIC8.46□□□□□ -1.06
ERCC3P19447 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC8.46□□□□□ -1.06
ERCC3P19447 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC8.46□□□□□ -1.06
ERCC3P19447 Z82195.1-201ENST00000604558 398 ntBASIC8.46□□□□□ -1.06
ERCC3P19447 AL450336.1-201ENST00000605180 586 ntBASIC8.46□□□□□ -1.06
ERCC3P19447 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC8.46□□□□□ -1.06
ERCC3P19447 AC068057.2-201ENST00000624047 895 ntBASIC8.46□□□□□ -1.06
ERCC3P19447 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC8.46□□□□□ -1.06
ERCC3P19447 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.06
ERCC3P19447 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
ERCC3P19447 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
ERCC3P19447 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC8.46□□□□□ -1.06
ERCC3P19447 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
ERCC3P19447 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ERCC3P19447 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
ERCC3P19447 FO082842.1-201ENST00000423552 1370 ntBASIC8.46□□□□□ -1.06
ERCC3P19447 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
ERCC3P19447 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ERCC3P19447 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC8.46□□□□□ -1.06
ERCC3P19447 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
ERCC3P19447 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ERCC3P19447 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC8.46□□□□□ -1.06
ERCC3P19447 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC8.45□□□□□ -1.06
ERCC3P19447 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 MTND5P11-201ENST00000511037 1812 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 UGT2B25P-201ENST00000511504 1586 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 FAUP2-201ENST00000394301 401 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 EEF1GP6-201ENST00000402309 905 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 PRELID1P2-201ENST00000407805 396 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC8.45□□□□□ -1.06
ERCC3P19447 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 MTND2P16-201ENST00000419987 799 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC8.45□□□□□ -1.06
ERCC3P19447 EEF1GP7-201ENST00000422983 703 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 AC115285.1-201ENST00000424879 736 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC8.45□□□□□ -1.06
ERCC3P19447 MTCO1P53-201ENST00000441633 699 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC8.45□□□□□ -1.06
ERCC3P19447 PPIAP32-201ENST00000449940 472 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 AC084878.1-201ENST00000480555 648 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 RPL23AP80-201ENST00000495605 424 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC8.45□□□□□ -1.06
ERCC3P19447 AK6-203ENST00000502819 743 ntTSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC8.45□□□□□ -1.06
ERCC3P19447 NACAP6-201ENST00000509572 622 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 AC113191.1-201ENST00000517759 403 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 AP001804.2-201ENST00000533932 910 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 AC139103.1-201ENST00000534696 1030 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 AC104229.1-201ENST00000561364 255 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 AC040162.2-201ENST00000573092 157 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 AC022022.2-201ENST00000602989 360 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC8.45□□□□□ -1.06
ERCC3P19447 AC139795.3-201ENST00000606358 541 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 AC097065.2-201ENST00000608159 533 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 AL031777.2-201ENST00000611953 196 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 AC012629.3-201ENST00000623397 328 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 CU459211.1-201ENST00000635667 749 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 AC132825.7-201ENST00000638744 335 ntBASIC8.45□□□□□ -1.06
ERCC3P19447 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 AC005261.2-201ENST00000593427 4258 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms