Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
TPM1P09493 RNA5SP115-201ENST00000411160 107 ntBASIC7.19□□□□□ -1.26
TPM1P09493 NME1P1-201ENST00000420914 382 ntBASIC7.19□□□□□ -1.26
TPM1P09493 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.19□□□□□ -1.26
TPM1P09493 AL590128.1-201ENST00000433407 286 ntBASIC7.19□□□□□ -1.26
TPM1P09493 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.19□□□□□ -1.26
TPM1P09493 AC133965.1-201ENST00000452984 354 ntBASIC7.19□□□□□ -1.26
TPM1P09493 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.19□□□□□ -1.26
TPM1P09493 AC114728.1-201ENST00000488289 483 ntBASIC7.19□□□□□ -1.26
TPM1P09493 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.19□□□□□ -1.26
TPM1P09493 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.19□□□□□ -1.26
TPM1P09493 SNRPCP6-201ENST00000528310 210 ntBASIC7.19□□□□□ -1.26
TPM1P09493 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.19□□□□□ -1.26
TPM1P09493 AC140063.1-201ENST00000541343 259 ntBASIC7.19□□□□□ -1.26
TPM1P09493 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.19□□□□□ -1.26
TPM1P09493 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.19□□□□□ -1.26
TPM1P09493 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC7.19□□□□□ -1.26
TPM1P09493 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.19□□□□□ -1.26
TPM1P09493 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
TPM1P09493 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.19□□□□□ -1.26
TPM1P09493 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
TPM1P09493 AC073857.1-201ENST00000625082 1054 ntBASIC7.19□□□□□ -1.26
TPM1P09493 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.19□□□□□ -1.26
TPM1P09493 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.19□□□□□ -1.26
TPM1P09493 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.19□□□□□ -1.26
TPM1P09493 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TPM1P09493 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.19□□□□□ -1.26
TPM1P09493 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TPM1P09493 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TPM1P09493 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC7.19□□□□□ -1.26
TPM1P09493 AC018628.1-201ENST00000624147 3819 ntBASIC7.19□□□□□ -1.26
TPM1P09493 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.19□□□□□ -1.26
TPM1P09493 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TPM1P09493 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TPM1P09493 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM1P09493 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM1P09493 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM1P09493 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.18□□□□□ -1.26
TPM1P09493 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC7.18□□□□□ -1.26
TPM1P09493 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM1P09493 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.18□□□□□ -1.26
TPM1P09493 AL157831.2-201ENST00000564681 3095 ntBASIC7.18□□□□□ -1.26
TPM1P09493 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
TPM1P09493 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM1P09493 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
TPM1P09493 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.18□□□□□ -1.26
TPM1P09493 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM1P09493 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM1P09493 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM1P09493 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.18□□□□□ -1.26
TPM1P09493 TMA16P2-201ENST00000413187 601 ntBASIC7.18□□□□□ -1.26
TPM1P09493 FDPSP6-201ENST00000425091 512 ntBASIC7.18□□□□□ -1.26
TPM1P09493 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC7.18□□□□□ -1.26
TPM1P09493 BX005266.3-201ENST00000443013 1075 ntBASIC7.18□□□□□ -1.26
TPM1P09493 SNRPBP1-201ENST00000443634 282 ntBASIC7.18□□□□□ -1.26
TPM1P09493 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC7.18□□□□□ -1.26
TPM1P09493 SRP68P2-201ENST00000456184 254 ntBASIC7.18□□□□□ -1.26
TPM1P09493 NDUFB4P1-201ENST00000462398 381 ntBASIC7.18□□□□□ -1.26
TPM1P09493 RN7SL223P-201ENST00000470401 294 ntBASIC7.18□□□□□ -1.26
TPM1P09493 AC091849.1-201ENST00000509920 121 ntBASIC7.18□□□□□ -1.26
TPM1P09493 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.18□□□□□ -1.26
TPM1P09493 AC023310.2-201ENST00000553844 547 ntBASIC7.18□□□□□ -1.26
TPM1P09493 AL162632.2-201ENST00000553933 399 ntBASIC7.18□□□□□ -1.26
TPM1P09493 AC024614.1-201ENST00000577546 307 ntBASIC7.18□□□□□ -1.26
TPM1P09493 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.18□□□□□ -1.26
TPM1P09493 MIR1273F-201ENST00000580581 99 ntBASIC7.18□□□□□ -1.26
TPM1P09493 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC7.18□□□□□ -1.26
TPM1P09493 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC7.18□□□□□ -1.26
TPM1P09493 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.18□□□□□ -1.26
TPM1P09493 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC7.18□□□□□ -1.26
TPM1P09493 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.18□□□□□ -1.26
TPM1P09493 AC114546.4-201ENST00000624413 369 ntBASIC7.18□□□□□ -1.26
TPM1P09493 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
TPM1P09493 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC7.18□□□□□ -1.26
TPM1P09493 MIR665-201ENST00000635949 72 ntBASIC7.18□□□□□ -1.26
TPM1P09493 AC140479.4-205ENST00000636339 820 ntBASIC7.18□□□□□ -1.26
TPM1P09493 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.18□□□□□ -1.26
TPM1P09493 AL512353.3-201ENST00000417517 1326 ntBASIC7.18□□□□□ -1.26
TPM1P09493 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TPM1P09493 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM1P09493 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
TPM1P09493 AC093844.1-201ENST00000514910 1361 ntBASIC7.18□□□□□ -1.26
TPM1P09493 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TPM1P09493 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TPM1P09493 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TPM1P09493 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.17□□□□□ -1.26
TPM1P09493 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TPM1P09493 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.17□□□□□ -1.26
TPM1P09493 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.17□□□□□ -1.26
TPM1P09493 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
TPM1P09493 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.17□□□□□ -1.26
TPM1P09493 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.17□□□□□ -1.26
TPM1P09493 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
TPM1P09493 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TPM1P09493 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TPM1P09493 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
TPM1P09493 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TPM1P09493 HMGA1P8-201ENST00000414130 321 ntBASIC7.17□□□□□ -1.26
TPM1P09493 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC7.17□□□□□ -1.26
TPM1P09493 RPS26P38-201ENST00000414476 348 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms