Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC062022.1-201ENST00000451026 1684 ntBASIC8.2□□□□□ -1.1
SCN11AQ9UI33 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 SLC20A1P1-201ENST00000413906 956 ntBASIC8.2□□□□□ -1.1
SCN11AQ9UI33 Z68694.1-201ENST00000413929 841 ntBASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC130360.1-201ENST00000425489 1117 ntBASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 RN7SL193P-201ENST00000491708 276 ntBASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC091965.3-201ENST00000506236 208 ntBASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC130365.2-201ENST00000525882 1201 ntBASIC8.2□□□□□ -1.1
SCN11AQ9UI33 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AP000662.1-201ENST00000530952 487 ntBASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AP001823.1-201ENST00000604056 1003 ntBASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 MAPK10-323ENST00000641493 3207 ntBASIC8.19□□□□□ -1.1
SCN11AQ9UI33 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 AC110602.1-201ENST00000437414 318 ntBASIC8.19□□□□□ -1.1
SCN11AQ9UI33 AC073109.1-201ENST00000445066 978 ntBASIC8.19□□□□□ -1.1
SCN11AQ9UI33 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 AC106800.3-201ENST00000511389 308 ntBASIC8.19□□□□□ -1.1
SCN11AQ9UI33 Y_RNA.667-201ENST00000516212 107 ntBASIC8.19□□□□□ -1.1
SCN11AQ9UI33 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 AC011379.1-201ENST00000508713 3025 ntBASIC8.19□□□□□ -1.1
SCN11AQ9UI33 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC8.19□□□□□ -1.1
SCN11AQ9UI33 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 CREM-203ENST00000344351 1625 ntTSL 2 BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 GAPDHP75-201ENST00000433910 943 ntBASIC8.18□□□□□ -1.1
SCN11AQ9UI33 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 HIGD1AP16-201ENST00000450986 258 ntBASIC8.18□□□□□ -1.1
SCN11AQ9UI33 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 NPM1P27-201ENST00000502784 830 ntBASIC8.18□□□□□ -1.1
SCN11AQ9UI33 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 AC008945.1-201ENST00000505144 499 ntBASIC8.18□□□□□ -1.1
SCN11AQ9UI33 RN7SKP238-201ENST00000516483 249 ntBASIC8.18□□□□□ -1.1
SCN11AQ9UI33 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
SCN11AQ9UI33 MAPK10-344ENST00000641718 3746 ntBASIC8.18□□□□□ -1.1
SCN11AQ9UI33 BIN2P1-201ENST00000504996 1530 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms