Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AP001002.1-201ENST00000625148 1513 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC022613.3-201ENST00000560740 1346 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 RNA5SP396-201ENST00000364834 120 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 RBBP4P5-201ENST00000398583 1266 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 RN7SKP85-201ENST00000411349 318 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 MTND1P10-201ENST00000426108 832 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 MTND4LP7-201ENST00000431728 294 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 FECHP1-201ENST00000431896 1214 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC105052.2-201ENST00000434317 794 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 DNAJC19P5-201ENST00000443295 316 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 TVP23CP1-201ENST00000450317 639 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 RPL36AP55-201ENST00000454114 305 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 RPL17P2-201ENST00000491913 451 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 RN7SL306P-201ENST00000492941 296 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 HMGN1P15-201ENST00000513870 295 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 AP003102.1-201ENST00000525638 661 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 AP004607.5-201ENST00000532034 217 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC068631.3-201ENST00000538831 225 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 UBE2CP4-201ENST00000561405 535 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 MIR4420-201ENST00000583944 77 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 OR4H6P-202ENST00000603819 340 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC111186.1-201ENST00000604684 130 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC027271.1-201ENST00000610270 610 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC016590.3-201ENST00000611171 753 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 AL139123.1-201ENST00000612008 430 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 AL359263.1-201ENST00000441188 2796 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 AC022905.1-201ENST00000503430 3048 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.35□□□□□ -1.39
SNX18Q96RF0 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX18Q96RF0 BRD7P1-201ENST00000557705 1915 ntBASIC6.35□□□□□ -1.39
SNX18Q96RF0 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC067942.1-201ENST00000488045 1493 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 Y_RNA.62-201ENST00000362840 99 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.34□□□□□ -1.39
SNX18Q96RF0 RPL31P53-201ENST00000457065 348 ntBASIC6.34□□□□□ -1.39
SNX18Q96RF0 BX323845.2-201ENST00000458382 234 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms