Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC10.04□□□□□ -0.8
VPS8Q8N3P4 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC10.04□□□□□ -0.8
VPS8Q8N3P4 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC10.04□□□□□ -0.8
VPS8Q8N3P4 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VPS8Q8N3P4 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC10.04□□□□□ -0.8
VPS8Q8N3P4 AL683826.1-201ENST00000624104 627 ntBASIC10.04□□□□□ -0.8
VPS8Q8N3P4 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS8Q8N3P4 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS8Q8N3P4 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
VPS8Q8N3P4 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC10.04□□□□□ -0.8
VPS8Q8N3P4 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 AC018717.1-201ENST00000457712 1505 ntBASIC10.03□□□□□ -0.8
VPS8Q8N3P4 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 RBBP4P5-201ENST00000398583 1266 ntBASIC10.03□□□□□ -0.8
VPS8Q8N3P4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 AC092865.3-201ENST00000425390 1026 ntBASIC10.03□□□□□ -0.8
VPS8Q8N3P4 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 RN7SL104P-201ENST00000498686 293 ntBASIC10.03□□□□□ -0.8
VPS8Q8N3P4 Vault.2-201ENST00000516519 98 ntBASIC10.03□□□□□ -0.8
VPS8Q8N3P4 AC073581.1-201ENST00000519036 575 ntBASIC10.03□□□□□ -0.8
VPS8Q8N3P4 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 BCAS2P1-201ENST00000528022 632 ntBASIC10.03□□□□□ -0.8
VPS8Q8N3P4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC10.03□□□□□ -0.8
VPS8Q8N3P4 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
VPS8Q8N3P4 CDY5P-201ENST00000411487 1580 ntBASIC10.02□□□□□ -0.8
VPS8Q8N3P4 CDY9P-201ENST00000451397 1580 ntBASIC10.02□□□□□ -0.8
VPS8Q8N3P4 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC10.02□□□□□ -0.8
VPS8Q8N3P4 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 ZSWIM5P3-201ENST00000511265 2743 ntBASIC10.02□□□□□ -0.81
VPS8Q8N3P4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 AL590004.3-202ENST00000445883 451 ntBASIC10.02□□□□□ -0.81
VPS8Q8N3P4 AL133351.3-201ENST00000454998 193 ntBASIC10.02□□□□□ -0.81
VPS8Q8N3P4 AC005017.1-201ENST00000482002 490 ntBASIC10.02□□□□□ -0.81
VPS8Q8N3P4 RN7SL170P-201ENST00000487098 295 ntBASIC10.02□□□□□ -0.81
VPS8Q8N3P4 AC091965.3-201ENST00000506236 208 ntBASIC10.02□□□□□ -0.81
VPS8Q8N3P4 SNX18P25-201ENST00000510539 758 ntBASIC10.02□□□□□ -0.81
VPS8Q8N3P4 KHDC1P1-201ENST00000511053 508 ntBASIC10.02□□□□□ -0.81
VPS8Q8N3P4 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 MIR7159-201ENST00000620587 66 ntBASIC10.02□□□□□ -0.81
VPS8Q8N3P4 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS8Q8N3P4 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 RNU1-65P-201ENST00000363919 148 ntBASIC10.01□□□□□ -0.81
VPS8Q8N3P4 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 AC097721.1-201ENST00000427150 1253 ntBASIC10.01□□□□□ -0.81
VPS8Q8N3P4 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 MGAT2P1-201ENST00000449718 797 ntBASIC10.01□□□□□ -0.81
VPS8Q8N3P4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 RPS27P20-201ENST00000492051 246 ntBASIC10.01□□□□□ -0.81
VPS8Q8N3P4 AP001858.2-201ENST00000536213 601 ntBASIC10.01□□□□□ -0.81
VPS8Q8N3P4 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 AC005332.4-201ENST00000592752 579 ntBASIC10.01□□□□□ -0.81
VPS8Q8N3P4 AL132796.3-201ENST00000624703 900 ntBASIC10.01□□□□□ -0.81
VPS8Q8N3P4 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
VPS8Q8N3P4 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms