Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RPL21P50-201ENST00000417698 477 ntBASIC7.57□□□□□ -1.2
CCNA1P78396 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC7.57□□□□□ -1.2
CCNA1P78396 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.57□□□□□ -1.2
CCNA1P78396 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CCNA1P78396 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CCNA1P78396 AC110602.1-201ENST00000437414 318 ntBASIC7.57□□□□□ -1.2
CCNA1P78396 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.57□□□□□ -1.2
CCNA1P78396 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.57□□□□□ -1.2
CCNA1P78396 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CCNA1P78396 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.57□□□□□ -1.2
CCNA1P78396 AC009879.1-201ENST00000520029 839 ntBASIC7.57□□□□□ -1.2
CCNA1P78396 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.57□□□□□ -1.2
CCNA1P78396 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.57□□□□□ -1.2
CCNA1P78396 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.57□□□□□ -1.2
CCNA1P78396 AL049840.5-201ENST00000602827 552 ntBASIC7.57□□□□□ -1.2
CCNA1P78396 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.57□□□□□ -1.2
CCNA1P78396 AL365181.4-201ENST00000609800 547 ntBASIC7.57□□□□□ -1.2
CCNA1P78396 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.57□□□□□ -1.2
CCNA1P78396 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCNA1P78396 RACGAP1P-201ENST00000550663 1879 ntBASIC7.57□□□□□ -1.2
CCNA1P78396 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CCNA1P78396 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCNA1P78396 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCNA1P78396 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
CCNA1P78396 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCNA1P78396 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCNA1P78396 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCNA1P78396 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.56□□□□□ -1.2
CCNA1P78396 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.56□□□□□ -1.2
CCNA1P78396 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCNA1P78396 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.56□□□□□ -1.2
CCNA1P78396 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
CCNA1P78396 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCNA1P78396 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.56□□□□□ -1.2
CCNA1P78396 AKAP17BP-201ENST00000431706 2719 ntBASIC7.56□□□□□ -1.2
CCNA1P78396 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.56□□□□□ -1.2
CCNA1P78396 FLJ42393-201ENST00000623801 2270 ntBASIC7.56□□□□□ -1.2
CCNA1P78396 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.56□□□□□ -1.2
CCNA1P78396 AL139805.1-201ENST00000407837 289 ntBASIC7.56□□□□□ -1.2
CCNA1P78396 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.56□□□□□ -1.2
CCNA1P78396 RN7SKP271-201ENST00000410528 320 ntBASIC7.56□□□□□ -1.2
CCNA1P78396 OSTCP4-201ENST00000424397 449 ntBASIC7.56□□□□□ -1.2
CCNA1P78396 AC018638.3-201ENST00000461273 132 ntBASIC7.56□□□□□ -1.2
CCNA1P78396 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.56□□□□□ -1.2
CCNA1P78396 GM2AP2-201ENST00000491764 562 ntBASIC7.56□□□□□ -1.2
CCNA1P78396 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.56□□□□□ -1.2
CCNA1P78396 AC131392.1-201ENST00000506490 633 ntBASIC7.56□□□□□ -1.2
CCNA1P78396 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CCNA1P78396 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.56□□□□□ -1.2
CCNA1P78396 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.56□□□□□ -1.2
CCNA1P78396 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CCNA1P78396 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.56□□□□□ -1.2
CCNA1P78396 AL162632.2-201ENST00000553933 399 ntBASIC7.56□□□□□ -1.2
CCNA1P78396 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.56□□□□□ -1.2
CCNA1P78396 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.56□□□□□ -1.2
CCNA1P78396 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.56□□□□□ -1.2
CCNA1P78396 AL138895.2-201ENST00000603019 178 ntBASIC7.56□□□□□ -1.2
CCNA1P78396 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.56□□□□□ -1.2
CCNA1P78396 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.56□□□□□ -1.2
CCNA1P78396 AC010333.3-201ENST00000615100 402 ntBASIC7.56□□□□□ -1.2
CCNA1P78396 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.56□□□□□ -1.2
CCNA1P78396 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.56□□□□□ -1.2
CCNA1P78396 AC073488.9-201ENST00000631601 754 ntBASIC7.56□□□□□ -1.2
CCNA1P78396 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.56□□□□□ -1.2
CCNA1P78396 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.56□□□□□ -1.2
CCNA1P78396 AC020978.6-201ENST00000571197 3177 ntBASIC7.56□□□□□ -1.2
CCNA1P78396 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCNA1P78396 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CCNA1P78396 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CCNA1P78396 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CCNA1P78396 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCNA1P78396 CASC19-246ENST00000641625 1606 ntBASIC7.56□□□□□ -1.2
CCNA1P78396 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.56□□□□□ -1.2
CCNA1P78396 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCNA1P78396 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCNA1P78396 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCNA1P78396 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCNA1P78396 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCNA1P78396 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CCNA1P78396 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCNA1P78396 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CCNA1P78396 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.55□□□□□ -1.2
CCNA1P78396 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.55□□□□□ -1.2
CCNA1P78396 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.55□□□□□ -1.2
CCNA1P78396 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CCNA1P78396 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCNA1P78396 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCNA1P78396 RN7SKP275-201ENST00000364626 301 ntBASIC7.55□□□□□ -1.2
CCNA1P78396 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
CCNA1P78396 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.55□□□□□ -1.2
CCNA1P78396 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.55□□□□□ -1.2
CCNA1P78396 AL035422.1-201ENST00000414193 397 ntBASIC7.55□□□□□ -1.2
CCNA1P78396 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.55□□□□□ -1.2
CCNA1P78396 AC002127.1-201ENST00000421305 225 ntBASIC7.55□□□□□ -1.2
CCNA1P78396 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.55□□□□□ -1.2
CCNA1P78396 AMYP1-201ENST00000440059 1023 ntBASIC7.55□□□□□ -1.2
CCNA1P78396 OR52I1-201ENST00000450052 1050 ntBASIC7.55□□□□□ -1.2
CCNA1P78396 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.55□□□□□ -1.2
CCNA1P78396 AC009963.3-201ENST00000458090 486 ntBASIC7.55□□□□□ -1.2
CCNA1P78396 HMGN1P17-201ENST00000513734 295 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms