Protein–RNA interactions for Protein: P35548

MSX2, Homeobox protein MSX-2, humanhuman

Predicted RBP Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2P35548 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.68□□□□□ -1.34
MSX2P35548 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC6.68□□□□□ -1.34
MSX2P35548 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.68□□□□□ -1.34
MSX2P35548 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.68□□□□□ -1.34
MSX2P35548 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
MSX2P35548 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MSX2P35548 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MSX2P35548 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MSX2P35548 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.67□□□□□ -1.34
MSX2P35548 WASF5P-205ENST00000428639 1455 ntBASIC6.67□□□□□ -1.34
MSX2P35548 AL391261.1-201ENST00000555712 1479 ntBASIC6.67□□□□□ -1.34
MSX2P35548 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MSX2P35548 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MSX2P35548 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
MSX2P35548 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC6.67□□□□□ -1.34
MSX2P35548 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
MSX2P35548 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
MSX2P35548 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
MSX2P35548 PPCS-204ENST00000372562 966 ntTSL 2 BASIC6.67□□□□□ -1.34
MSX2P35548 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.67□□□□□ -1.34
MSX2P35548 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
MSX2P35548 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.67□□□□□ -1.34
MSX2P35548 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.67□□□□□ -1.34
MSX2P35548 RN7SKP271-201ENST00000410528 320 ntBASIC6.67□□□□□ -1.34
MSX2P35548 AC107081.1-201ENST00000414975 361 ntBASIC6.67□□□□□ -1.34
MSX2P35548 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.67□□□□□ -1.34
MSX2P35548 AC092570.3-201ENST00000420113 693 ntBASIC6.67□□□□□ -1.34
MSX2P35548 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.67□□□□□ -1.34
MSX2P35548 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
MSX2P35548 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MSX2P35548 AL390879.1-201ENST00000439143 386 ntBASIC6.67□□□□□ -1.34
MSX2P35548 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.67□□□□□ -1.34
MSX2P35548 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC6.67□□□□□ -1.34
MSX2P35548 SUMO2P1-206ENST00000445436 284 ntBASIC6.67□□□□□ -1.34
MSX2P35548 OR51P1P-201ENST00000447547 942 ntBASIC6.67□□□□□ -1.34
MSX2P35548 PMS2P11-201ENST00000451831 574 ntBASIC6.67□□□□□ -1.34
MSX2P35548 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.67□□□□□ -1.34
MSX2P35548 AC022730.2-201ENST00000465359 452 ntBASIC6.67□□□□□ -1.34
MSX2P35548 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.67□□□□□ -1.34
MSX2P35548 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC6.67□□□□□ -1.34
MSX2P35548 AC090589.1-201ENST00000473109 362 ntBASIC6.67□□□□□ -1.34
MSX2P35548 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.67□□□□□ -1.34
MSX2P35548 AC010468.3-201ENST00000508225 458 ntBASIC6.67□□□□□ -1.34
MSX2P35548 OR7E83P-201ENST00000511021 970 ntBASIC6.67□□□□□ -1.34
MSX2P35548 MTCO3P27-201ENST00000514397 196 ntBASIC6.67□□□□□ -1.34
MSX2P35548 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.67□□□□□ -1.34
MSX2P35548 AC104115.2-201ENST00000523026 687 ntBASIC6.67□□□□□ -1.34
MSX2P35548 OR7E154P-201ENST00000525174 932 ntBASIC6.67□□□□□ -1.34
MSX2P35548 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
MSX2P35548 OR9L1P-201ENST00000529493 933 ntBASIC6.67□□□□□ -1.34
MSX2P35548 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.67□□□□□ -1.34
MSX2P35548 CKS1BP1-201ENST00000555221 240 ntBASIC6.67□□□□□ -1.34
MSX2P35548 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.67□□□□□ -1.34
MSX2P35548 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC6.67□□□□□ -1.34
MSX2P35548 SNORA70D-201ENST00000578836 135 ntBASIC6.67□□□□□ -1.34
MSX2P35548 AC008088.1-201ENST00000580993 280 ntBASIC6.67□□□□□ -1.34
MSX2P35548 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.67□□□□□ -1.34
MSX2P35548 OR7A11P-201ENST00000597719 953 ntBASIC6.67□□□□□ -1.34
MSX2P35548 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC6.67□□□□□ -1.34
MSX2P35548 AC022022.2-201ENST00000602989 360 ntBASIC6.67□□□□□ -1.34
MSX2P35548 DIMT1P1-201ENST00000603970 763 ntBASIC6.67□□□□□ -1.34
MSX2P35548 AL109918.2-201ENST00000605188 279 ntBASIC6.67□□□□□ -1.34
MSX2P35548 AL355802.4-201ENST00000607635 548 ntBASIC6.67□□□□□ -1.34
MSX2P35548 MIR6751-201ENST00000610479 63 ntBASIC6.67□□□□□ -1.34
MSX2P35548 AC135050.6-202ENST00000613584 392 ntBASIC6.67□□□□□ -1.34
MSX2P35548 AC004477.3-201ENST00000614061 590 ntBASIC6.67□□□□□ -1.34
MSX2P35548 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.67□□□□□ -1.34
MSX2P35548 AC243830.2-201ENST00000618067 630 ntBASIC6.67□□□□□ -1.34
MSX2P35548 AC131009.3-201ENST00000621809 287 ntBASIC6.67□□□□□ -1.34
MSX2P35548 AP002791.1-201ENST00000623291 381 ntBASIC6.67□□□□□ -1.34
MSX2P35548 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.67□□□□□ -1.34
MSX2P35548 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.67□□□□□ -1.34
MSX2P35548 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
MSX2P35548 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
MSX2P35548 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
MSX2P35548 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MSX2P35548 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MSX2P35548 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
MSX2P35548 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
MSX2P35548 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
MSX2P35548 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MSX2P35548 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MSX2P35548 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.67□□□□□ -1.34
MSX2P35548 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
MSX2P35548 DDX50P1-201ENST00000438163 2400 ntBASIC6.67□□□□□ -1.34
MSX2P35548 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.67□□□□□ -1.34
MSX2P35548 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MSX2P35548 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MSX2P35548 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MSX2P35548 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.66□□□□□ -1.34
MSX2P35548 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.66□□□□□ -1.34
MSX2P35548 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
MSX2P35548 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
MSX2P35548 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.66□□□□□ -1.34
MSX2P35548 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MSX2P35548 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
MSX2P35548 AC110792.3-201ENST00000595906 1614 ntBASIC6.66□□□□□ -1.34
MSX2P35548 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.66□□□□□ -1.34
MSX2P35548 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MSX2P35548 RNU6-386P-201ENST00000362650 107 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms