Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC7.1□□□□□ -1.27
COL6A2P12110 PTP4A1P7-201ENST00000423476 514 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 AC130472.1-201ENST00000427885 309 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC7.1□□□□□ -1.27
COL6A2P12110 AL591719.1-201ENST00000444669 744 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 EXOSC3P1-201ENST00000448649 500 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 RPL31P20-201ENST00000449593 360 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7.1□□□□□ -1.27
COL6A2P12110 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC7.1□□□□□ -1.27
COL6A2P12110 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC7.1□□□□□ -1.27
COL6A2P12110 AC126615.1-201ENST00000470084 630 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 SETP6-201ENST00000479329 568 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 CEACAMP3-202ENST00000483806 638 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC7.1□□□□□ -1.27
COL6A2P12110 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 LINC01085-203ENST00000511195 326 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC7.1□□□□□ -1.27
COL6A2P12110 AC010476.1-201ENST00000519111 851 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC7.1□□□□□ -1.27
COL6A2P12110 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.1□□□□□ -1.27
COL6A2P12110 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC7.1□□□□□ -1.27
COL6A2P12110 AC093014.1-201ENST00000548926 724 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC7.1□□□□□ -1.27
COL6A2P12110 OR5BK1P-201ENST00000550421 823 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC7.1□□□□□ -1.27
COL6A2P12110 FXNP1-201ENST00000555153 337 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC7.1□□□□□ -1.27
COL6A2P12110 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.1□□□□□ -1.27
COL6A2P12110 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7.1□□□□□ -1.27
COL6A2P12110 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC7.1□□□□□ -1.27
COL6A2P12110 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.1□□□□□ -1.27
COL6A2P12110 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC7.1□□□□□ -1.27
COL6A2P12110 AC005242.1-201ENST00000585658 438 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
COL6A2P12110 AL450336.1-201ENST00000605180 586 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 AC015849.2-201ENST00000605738 409 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 RN7SL760P-201ENST00000607344 270 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 FAM72A-208ENST00000607379 1139 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.1□□□□□ -1.27
COL6A2P12110 AL669830.1-201ENST00000621457 656 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 AL353608.4-201ENST00000624487 1188 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.1□□□□□ -1.27
COL6A2P12110 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC7.1□□□□□ -1.27
COL6A2P12110 OR5AC4P-202ENST00000642086 985 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
COL6A2P12110 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 AL121949.2-201ENST00000403446 1548 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 ABCA11P-202ENST00000504019 2110 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
COL6A2P12110 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
COL6A2P12110 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.1□□□□□ -1.27
COL6A2P12110 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.1□□□□□ -1.27
COL6A2P12110 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.1□□□□□ -1.27
COL6A2P12110 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.1□□□□□ -1.27
COL6A2P12110 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC7.1□□□□□ -1.27
COL6A2P12110 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.09□□□□□ -1.27
COL6A2P12110 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.09□□□□□ -1.27
COL6A2P12110 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL6A2P12110 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL6A2P12110 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL6A2P12110 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.09□□□□□ -1.27
COL6A2P12110 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.09□□□□□ -1.27
COL6A2P12110 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.09□□□□□ -1.27
COL6A2P12110 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.09□□□□□ -1.27
COL6A2P12110 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.09□□□□□ -1.27
COL6A2P12110 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.09□□□□□ -1.27
COL6A2P12110 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.09□□□□□ -1.27
COL6A2P12110 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
COL6A2P12110 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.09□□□□□ -1.27
COL6A2P12110 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL6A2P12110 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL6A2P12110 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL6A2P12110 RNA5SP448-201ENST00000363151 111 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 RNU6-1017P-201ENST00000363613 106 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL6A2P12110 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.09□□□□□ -1.27
COL6A2P12110 AC096533.1-201ENST00000411645 353 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 FTOP1-201ENST00000419363 861 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.09□□□□□ -1.27
COL6A2P12110 AC006994.1-201ENST00000438212 839 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL6A2P12110 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC7.09□□□□□ -1.27
COL6A2P12110 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC7.09□□□□□ -1.27
COL6A2P12110 RNU7-157P-201ENST00000459600 66 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 RPL34P22-201ENST00000468193 318 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 PPM1AP1-201ENST00000502740 1135 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC7.09□□□□□ -1.27
COL6A2P12110 RPL37-205ENST00000509877 637 ntTSL 5 BASIC7.09□□□□□ -1.27
COL6A2P12110 FABP5P6-201ENST00000510588 409 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC7.09□□□□□ -1.27
COL6A2P12110 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC7.09□□□□□ -1.27
COL6A2P12110 AP006437.1-202ENST00000530327 933 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms