Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UBCP0CG48 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UBCP0CG48 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBCP0CG48 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.81□□□□□ -1.48
UBCP0CG48 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UBCP0CG48 ZNF806-201ENST00000438300 1774 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBCP0CG48 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBCP0CG48 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBCP0CG48 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
UBCP0CG48 SEPT7P2-202ENST00000398921 823 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBCP0CG48 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.81□□□□□ -1.48
UBCP0CG48 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.81□□□□□ -1.48
UBCP0CG48 RPL23AP28-201ENST00000448062 470 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 AC079193.1-201ENST00000460497 588 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 RPL23AP68-201ENST00000480924 445 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 RN7SL518P-201ENST00000491887 280 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.81□□□□□ -1.48
UBCP0CG48 PHBP2-201ENST00000532859 806 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 AC140063.1-201ENST00000541343 259 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.81□□□□□ -1.48
UBCP0CG48 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.81□□□□□ -1.48
UBCP0CG48 MIR3187-201ENST00000583431 70 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.81□□□□□ -1.48
UBCP0CG48 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.81□□□□□ -1.48
UBCP0CG48 AL590032.1-201ENST00000604920 252 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 AC012510.1-201ENST00000607946 759 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 AL161931.1-201ENST00000612768 246 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 AC073857.1-201ENST00000625082 1054 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 AL355480.4-201ENST00000626823 69 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.81□□□□□ -1.48
UBCP0CG48 MIR665-201ENST00000635949 72 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.81□□□□□ -1.48
UBCP0CG48 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBCP0CG48 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBCP0CG48 AL137058.3-201ENST00000624531 3099 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
UBCP0CG48 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.81□□□□□ -1.48
UBCP0CG48 HSPD1P8-201ENST00000400121 1658 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBCP0CG48 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UBCP0CG48 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
UBCP0CG48 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBCP0CG48 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UBCP0CG48 NCOA4P2-201ENST00000340589 1813 ntBASIC5.81□□□□□ -1.48
UBCP0CG48 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UBCP0CG48 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
UBCP0CG48 AC010624.4-201ENST00000597606 1351 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 AC119674.1-213ENST00000641177 1386 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
UBCP0CG48 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.8□□□□□ -1.48
UBCP0CG48 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.8□□□□□ -1.48
UBCP0CG48 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBCP0CG48 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
UBCP0CG48 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBCP0CG48 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
UBCP0CG48 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.8□□□□□ -1.48
UBCP0CG48 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBCP0CG48 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBCP0CG48 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC5.8□□□□□ -1.48
UBCP0CG48 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBCP0CG48 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBCP0CG48 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.8□□□□□ -1.48
UBCP0CG48 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBCP0CG48 RNA5SP427-201ENST00000365323 119 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBCP0CG48 AL451046.1-201ENST00000406097 534 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 RN7SKP268-201ENST00000411107 316 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 RBMY2JP-201ENST00000425544 1059 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 RPS10P21-201ENST00000430654 475 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.8□□□□□ -1.48
UBCP0CG48 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.8□□□□□ -1.48
UBCP0CG48 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.8□□□□□ -1.48
UBCP0CG48 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.8□□□□□ -1.48
UBCP0CG48 RPL7AP23-201ENST00000482625 776 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 AC092824.1-201ENST00000483524 576 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.8□□□□□ -1.48
UBCP0CG48 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.8□□□□□ -1.48
UBCP0CG48 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.8□□□□□ -1.48
UBCP0CG48 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.8□□□□□ -1.48
UBCP0CG48 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC5.8□□□□□ -1.48
UBCP0CG48 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
UBCP0CG48 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.8□□□□□ -1.48
UBCP0CG48 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.8□□□□□ -1.48
UBCP0CG48 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.8□□□□□ -1.48
UBCP0CG48 AL132640.1-201ENST00000559594 619 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 AC091304.4-201ENST00000565703 620 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.8□□□□□ -1.48
UBCP0CG48 EXOSC3P2-201ENST00000594464 497 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 AL356986.1-201ENST00000604085 341 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 MIR6732-201ENST00000619365 60 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
UBCP0CG48 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBCP0CG48 MAPK10-287ENST00000641217 3037 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBCP0CG48 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBCP0CG48 AC074141.1-201ENST00000588129 2995 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms