Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 Y_RNA.62-201ENST00000362840 99 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 RPL12P1-201ENST00000374520 498 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 PTGES3P2-201ENST00000407942 482 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AC017019.1-201ENST00000426129 261 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 GTF3AP6-201ENST00000432585 986 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AL606490.8-201ENST00000441624 319 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AL022319.1-201ENST00000458183 1167 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 NDUFB4P1-201ENST00000462398 381 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 RN7SL688P-201ENST00000471754 275 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 RPL23AP8-201ENST00000479812 475 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 FTH1P8-201ENST00000498161 514 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 EEF1B2P2-201ENST00000519625 676 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 GLYATL1P4-201ENST00000529326 906 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AL591767.3-201ENST00000554632 525 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 NDUFA3P4-201ENST00000560814 250 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 RPS7P1-201ENST00000571702 585 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AC067852.5-201ENST00000589299 310 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AC063962.1-201ENST00000608199 521 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AC112503.2-201ENST00000609005 552 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AP000770.2-201ENST00000623694 100 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AC119674.1-220ENST00000641502 1048 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AL359694.2-201ENST00000567753 1615 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 AC010401.2-201ENST00000575137 4934 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 MIR541-201ENST00000401360 84 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 RN7SKP254-201ENST00000410685 310 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 MTND1P10-201ENST00000426108 832 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 NIP7P1-201ENST00000433227 512 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 OR52E7P-201ENST00000452394 933 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 AC093799.1-201ENST00000452411 499 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 C1DP3-201ENST00000455013 423 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 RN7SL775P-201ENST00000498361 336 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 AC021820.1-201ENST00000525564 808 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 MIR4301-201ENST00000577203 66 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 MIR4470-201ENST00000583453 72 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 PRELID3BP3-201ENST00000584963 545 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms