Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC092421.1-201ENST00000448148 418 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC016489.1-201ENST00000461109 375 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 TAAR3P-201ENST00000466706 1078 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 TAAR3P-202ENST00000481759 1025 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 NDUFS5P2-201ENST00000484004 306 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC097263.1-201ENST00000496795 606 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 HPRT1P2-201ENST00000505250 544 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC074087.1-201ENST00000512059 724 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AK6-204ENST00000512561 587 ntTSL 5 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 IGKV3D-31-201ENST00000519131 281 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AP001994.1-201ENST00000527539 826 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AP005597.1-201ENST00000534192 802 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 DNM1P31-201ENST00000564149 696 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 RN7SL697P-201ENST00000582484 299 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC015802.2-201ENST00000589690 189 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC125494.3-201ENST00000602759 455 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC114878.2-201ENST00000604863 1251 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC103724.4-201ENST00000605981 292 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC135050.6-202ENST00000613584 392 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 ZNF663P-202ENST00000641770 1131 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 BX649567.1-201ENST00000642071 1134 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC006213.6-201ENST00000623722 4179 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 AC093297.3-201ENST00000607056 2517 ntBASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRAIPQ9BWF2 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 HSP90AB2P-201ENST00000507090 2176 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 RNU4-92P-201ENST00000363783 136 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 SNORD46-201ENST00000364043 104 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 RNA5SP23-201ENST00000391006 105 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AC013404.1-201ENST00000413068 249 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AL365338.1-201ENST00000422282 858 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 HIGD1AP12-201ENST00000427832 281 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 MTCO1P52-201ENST00000433928 531 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 FTH1P16-201ENST00000435241 552 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 VN1R40P-201ENST00000455196 941 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AC022730.2-201ENST00000465359 452 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 PSAT1P4-201ENST00000466500 526 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 CEACAMP3-202ENST00000483806 638 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AC079768.1-201ENST00000503181 711 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AC091515.1-201ENST00000548110 679 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AP001542.2-201ENST00000593141 364 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AC008385.1-201ENST00000604421 355 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AL138478.1-201ENST00000612252 832 ntBASIC8.42□□□□□ -1.06
TRAIPQ9BWF2 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms