Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 AC025809.2-201ENST00000625085 1802 ntBASIC9.4□□□□□ -0.9
SIN3AQ96ST3 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 KCNMB3P1-202ENST00000493696 3389 ntBASIC9.4□□□□□ -0.9
SIN3AQ96ST3 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 RNA5SP512-201ENST00000364550 120 ntBASIC9.4□□□□□ -0.9
SIN3AQ96ST3 AL023284.3-201ENST00000407767 334 ntBASIC9.4□□□□□ -0.9
SIN3AQ96ST3 Z82198.3-201ENST00000421145 199 ntBASIC9.4□□□□□ -0.9
SIN3AQ96ST3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 AC106822.1-201ENST00000502647 526 ntBASIC9.4□□□□□ -0.9
SIN3AQ96ST3 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 TPRX1P1-201ENST00000557620 319 ntBASIC9.4□□□□□ -0.9
SIN3AQ96ST3 AC025283.1-201ENST00000572039 734 ntBASIC9.4□□□□□ -0.9
SIN3AQ96ST3 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 AC073862.4-201ENST00000622982 854 ntBASIC9.4□□□□□ -0.9
SIN3AQ96ST3 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.91
SIN3AQ96ST3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC9.4□□□□□ -0.91
SIN3AQ96ST3 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 GTF3AP6-201ENST00000432585 986 ntBASIC9.39□□□□□ -0.91
SIN3AQ96ST3 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 AL445991.1-201ENST00000450381 475 ntBASIC9.39□□□□□ -0.91
SIN3AQ96ST3 CCNJP2-201ENST00000457810 1163 ntBASIC9.39□□□□□ -0.91
SIN3AQ96ST3 AC004890.1-201ENST00000461005 181 ntBASIC9.39□□□□□ -0.91
SIN3AQ96ST3 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 AC068522.1-201ENST00000482895 345 ntBASIC9.39□□□□□ -0.91
SIN3AQ96ST3 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 PABPC1P8-201ENST00000452851 2086 ntBASIC9.39□□□□□ -0.91
SIN3AQ96ST3 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 AC008957.3-201ENST00000624112 2242 ntBASIC9.39□□□□□ -0.91
SIN3AQ96ST3 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SIN3AQ96ST3 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 AL034417.1-201ENST00000399343 800 ntBASIC9.38□□□□□ -0.91
SIN3AQ96ST3 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 AL356121.1-201ENST00000442911 156 ntBASIC9.38□□□□□ -0.91
SIN3AQ96ST3 AC234771.2-201ENST00000445718 597 ntBASIC9.38□□□□□ -0.91
SIN3AQ96ST3 RN7SL393P-201ENST00000463588 296 ntBASIC9.38□□□□□ -0.91
SIN3AQ96ST3 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 RNA5SP418-201ENST00000515951 117 ntBASIC9.38□□□□□ -0.91
SIN3AQ96ST3 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 AC037479.1-201ENST00000558361 625 ntBASIC9.38□□□□□ -0.91
SIN3AQ96ST3 AL589743.6-201ENST00000611025 117 ntBASIC9.38□□□□□ -0.91
SIN3AQ96ST3 MIR6085-201ENST00000618314 110 ntBASIC9.38□□□□□ -0.91
SIN3AQ96ST3 AC048341.3-201ENST00000619323 491 ntBASIC9.38□□□□□ -0.91
SIN3AQ96ST3 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
SIN3AQ96ST3 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SIN3AQ96ST3 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC9.37□□□□□ -0.91
SIN3AQ96ST3 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
SIN3AQ96ST3 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SIN3AQ96ST3 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC9.37□□□□□ -0.91
SIN3AQ96ST3 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC9.37□□□□□ -0.91
SIN3AQ96ST3 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms