Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 CCNHP1-201ENST00000513311 678 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AC015818.6-201ENST00000584274 634 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AL354702.2-202ENST00000641481 890 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 Z97989.1-201ENST00000531702 2421 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 AC079949.2-201ENST00000617117 2933 ntBASIC7.62□□□□□ -1.19
CDK5RAP3Q96JB5 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 LPAL2-203ENST00000454031 2498 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 NPM1P14-201ENST00000343743 866 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC074375.1-201ENST00000372993 192 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 RNU6-316P-201ENST00000391027 107 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 MTATP6P11-201ENST00000428071 670 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AL590128.1-201ENST00000433407 286 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AL356133.1-201ENST00000444762 372 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 RPL23AP28-201ENST00000448062 470 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC021146.11-201ENST00000503319 491 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC017007.1-201ENST00000511960 415 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC140063.1-201ENST00000541343 259 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC234775.3-201ENST00000564612 656 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 PRELID3BP3-201ENST00000584963 545 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC003001.2-201ENST00000616294 831 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC027506.1-201ENST00000621395 198 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC020923.1-201ENST00000624021 917 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC005858.3-201ENST00000624756 589 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AC092821.3-202ENST00000641304 2767 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 ZNF806-201ENST00000438300 1774 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AL591848.4-201ENST00000567832 3472 ntBASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.61□□□□□ -1.19
CDK5RAP3Q96JB5 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 AC096992.2-201ENST00000609553 1684 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 RNU1-55P-201ENST00000365510 158 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 RNA5SP474-201ENST00000391234 90 ntBASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC7.6□□□□□ -1.19
CDK5RAP3Q96JB5 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms