Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.43□□□□□ -1.38
NKX6-1P78426 RN7SL835P-201ENST00000579920 262 ntBASIC6.43□□□□□ -1.38
NKX6-1P78426 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.43□□□□□ -1.38
NKX6-1P78426 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC6.43□□□□□ -1.38
NKX6-1P78426 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.43□□□□□ -1.38
NKX6-1P78426 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.43□□□□□ -1.38
NKX6-1P78426 AC005021.1-201ENST00000608730 355 ntBASIC6.43□□□□□ -1.38
NKX6-1P78426 AL139123.1-201ENST00000612008 430 ntBASIC6.43□□□□□ -1.38
NKX6-1P78426 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.43□□□□□ -1.38
NKX6-1P78426 AL390882.1-201ENST00000618821 594 ntBASIC6.43□□□□□ -1.38
NKX6-1P78426 AP000770.2-201ENST00000623694 100 ntBASIC6.43□□□□□ -1.38
NKX6-1P78426 AC130456.6-201ENST00000623745 765 ntBASIC6.43□□□□□ -1.38
NKX6-1P78426 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC6.43□□□□□ -1.38
NKX6-1P78426 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.43□□□□□ -1.38
NKX6-1P78426 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.43□□□□□ -1.38
NKX6-1P78426 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX6-1P78426 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX6-1P78426 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.43□□□□□ -1.38
NKX6-1P78426 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX6-1P78426 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NKX6-1P78426 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX6-1P78426 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX6-1P78426 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX6-1P78426 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
NKX6-1P78426 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
NKX6-1P78426 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX6-1P78426 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.43□□□□□ -1.38
NKX6-1P78426 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX6-1P78426 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
NKX6-1P78426 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.43□□□□□ -1.38
NKX6-1P78426 RBM5-AS1-201ENST00000630404 1386 ntBASIC6.43□□□□□ -1.38
NKX6-1P78426 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.42□□□□□ -1.38
NKX6-1P78426 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.42□□□□□ -1.38
NKX6-1P78426 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
NKX6-1P78426 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NKX6-1P78426 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.42□□□□□ -1.38
NKX6-1P78426 MIR575-201ENST00000385013 94 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.42□□□□□ -1.38
NKX6-1P78426 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 NIFKP3-201ENST00000417799 865 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 AC114973.1-201ENST00000429057 632 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.42□□□□□ -1.38
NKX6-1P78426 AL512661.1-201ENST00000434586 1253 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 AC005040.1-201ENST00000437783 482 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC6.42□□□□□ -1.38
NKX6-1P78426 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.42□□□□□ -1.38
NKX6-1P78426 RPL23AP23-201ENST00000452590 471 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC6.42□□□□□ -1.38
NKX6-1P78426 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.42□□□□□ -1.38
NKX6-1P78426 RPL10P7-201ENST00000495649 625 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 TRAV31-201ENST00000502780 342 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.42□□□□□ -1.38
NKX6-1P78426 AC108120.1-201ENST00000506543 991 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.42□□□□□ -1.38
NKX6-1P78426 NPM1P21-201ENST00000513394 762 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.42□□□□□ -1.38
NKX6-1P78426 SCARNA11.1-201ENST00000516918 132 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 RBMS2P1-201ENST00000525031 1226 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 OR6M3P-201ENST00000531567 700 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 OR8X1P-201ENST00000534542 869 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 EGLN3P1-201ENST00000541727 720 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.42□□□□□ -1.38
NKX6-1P78426 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.42□□□□□ -1.38
NKX6-1P78426 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.42□□□□□ -1.38
NKX6-1P78426 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.42□□□□□ -1.38
NKX6-1P78426 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.42□□□□□ -1.38
NKX6-1P78426 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.42□□□□□ -1.38
NKX6-1P78426 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.42□□□□□ -1.38
NKX6-1P78426 COX6CP16-201ENST00000603667 216 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 AC018754.1-201ENST00000607486 925 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.42□□□□□ -1.38
NKX6-1P78426 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.42□□□□□ -1.38
NKX6-1P78426 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.42□□□□□ -1.38
NKX6-1P78426 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.42□□□□□ -1.38
NKX6-1P78426 AC006927.4-201ENST00000639187 543 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.42□□□□□ -1.38
NKX6-1P78426 AC087269.2-201ENST00000641764 975 ntBASIC6.42□□□□□ -1.38
NKX6-1P78426 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NKX6-1P78426 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.42□□□□□ -1.38
NKX6-1P78426 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NKX6-1P78426 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC6.42□□□□□ -1.38
NKX6-1P78426 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NKX6-1P78426 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.42□□□□□ -1.38
NKX6-1P78426 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.42□□□□□ -1.38
NKX6-1P78426 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NKX6-1P78426 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.42□□□□□ -1.38
NKX6-1P78426 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 516.5 ms