Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC087894.1-201ENST00000538359 518 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.36□□□□□ -1.39
CLRN1P58418 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.36□□□□□ -1.39
CLRN1P58418 NDUFA3P4-201ENST00000560814 250 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.36□□□□□ -1.39
CLRN1P58418 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.36□□□□□ -1.39
CLRN1P58418 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CLRN1P58418 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.36□□□□□ -1.39
CLRN1P58418 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.36□□□□□ -1.39
CLRN1P58418 PRR13P5-201ENST00000596581 442 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.36□□□□□ -1.39
CLRN1P58418 AC124016.2-201ENST00000610058 665 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.36□□□□□ -1.39
CLRN1P58418 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.36□□□□□ -1.39
CLRN1P58418 TSHZ2-205ENST00000626626 670 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.36□□□□□ -1.39
CLRN1P58418 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.36□□□□□ -1.39
CLRN1P58418 AC241377.2-202ENST00000636462 997 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 AL034408.1-201ENST00000637712 664 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.36□□□□□ -1.39
CLRN1P58418 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.36□□□□□ -1.39
CLRN1P58418 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 CUL4AP1-201ENST00000514750 1863 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 CR788268.1-201ENST00000603931 1809 ntBASIC6.36□□□□□ -1.39
CLRN1P58418 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLRN1P58418 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.36□□□□□ -1.39
CLRN1P58418 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CLRN1P58418 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.35□□□□□ -1.39
CLRN1P58418 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.35□□□□□ -1.39
CLRN1P58418 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.35□□□□□ -1.39
CLRN1P58418 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CLRN1P58418 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.35□□□□□ -1.39
CLRN1P58418 FBXL21-201ENST00000297158 1305 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.35□□□□□ -1.39
CLRN1P58418 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 RNA5SP472-201ENST00000363868 119 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 FAM204BP-201ENST00000369171 701 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 RPL22P22-201ENST00000395439 379 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 AP002530.1-201ENST00000405705 684 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 MIR1204-201ENST00000408388 67 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 RNU2-5P-201ENST00000410533 180 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 AC096533.1-201ENST00000411645 353 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.35□□□□□ -1.39
CLRN1P58418 RPL17P17-201ENST00000419491 557 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.35□□□□□ -1.39
CLRN1P58418 AC105052.2-201ENST00000434317 794 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 PHBP4-201ENST00000437447 837 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 AL390879.1-201ENST00000439143 386 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.35□□□□□ -1.39
CLRN1P58418 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.35□□□□□ -1.39
CLRN1P58418 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.35□□□□□ -1.39
CLRN1P58418 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.35□□□□□ -1.39
CLRN1P58418 RN7SL160P-201ENST00000468558 284 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 AP005202.1-201ENST00000489915 867 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC6.35□□□□□ -1.39
CLRN1P58418 RPL5P23-201ENST00000496040 868 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 MTCYBP35-201ENST00000503630 1137 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.35□□□□□ -1.39
CLRN1P58418 AC112673.1-201ENST00000513168 575 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.35□□□□□ -1.39
CLRN1P58418 AC087360.1-201ENST00000518788 616 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC6.35□□□□□ -1.39
CLRN1P58418 OR8K4P-201ENST00000534608 872 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.35□□□□□ -1.39
CLRN1P58418 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CLRN1P58418 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.35□□□□□ -1.39
CLRN1P58418 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.35□□□□□ -1.39
CLRN1P58418 AGGF1P9-201ENST00000561884 913 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 AC023827.2-201ENST00000566880 1061 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 AC010547.7-201ENST00000570323 333 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 AC061975.3-201ENST00000583209 244 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 MIR4470-201ENST00000583453 72 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.35□□□□□ -1.39
CLRN1P58418 NIFKP6-201ENST00000598115 845 ntBASIC6.35□□□□□ -1.39
CLRN1P58418 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CLRN1P58418 AL136139.1-201ENST00000605568 222 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms