Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC7.15□□□□□ -1.26
NEK3P51956 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC7.15□□□□□ -1.26
NEK3P51956 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.15□□□□□ -1.26
NEK3P51956 AC022001.1-201ENST00000605193 268 ntBASIC7.15□□□□□ -1.26
NEK3P51956 CXADRP3-202ENST00000617265 1100 ntBASIC7.15□□□□□ -1.26
NEK3P51956 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC7.15□□□□□ -1.26
NEK3P51956 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.15□□□□□ -1.26
NEK3P51956 AL139254.2-202ENST00000641937 1156 ntBASIC7.15□□□□□ -1.26
NEK3P51956 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEK3P51956 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
NEK3P51956 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
NEK3P51956 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
NEK3P51956 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.15□□□□□ -1.27
NEK3P51956 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
NEK3P51956 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
NEK3P51956 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.15□□□□□ -1.27
NEK3P51956 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
NEK3P51956 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
NEK3P51956 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.15□□□□□ -1.27
NEK3P51956 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
NEK3P51956 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.15□□□□□ -1.27
NEK3P51956 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
NEK3P51956 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
NEK3P51956 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
NEK3P51956 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 MIR187-201ENST00000385062 109 ntBASIC7.14□□□□□ -1.27
NEK3P51956 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
NEK3P51956 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.14□□□□□ -1.27
NEK3P51956 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 AC013470.3-201ENST00000420252 1194 ntBASIC7.14□□□□□ -1.27
NEK3P51956 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.14□□□□□ -1.27
NEK3P51956 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 SNRPEP5-201ENST00000425442 278 ntBASIC7.14□□□□□ -1.27
NEK3P51956 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
NEK3P51956 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 AL121916.1-201ENST00000429405 308 ntBASIC7.14□□□□□ -1.27
NEK3P51956 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.14□□□□□ -1.27
NEK3P51956 PMS2P9-201ENST00000441237 515 ntBASIC7.14□□□□□ -1.27
NEK3P51956 TXNP2-201ENST00000443918 295 ntBASIC7.14□□□□□ -1.27
NEK3P51956 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.14□□□□□ -1.27
NEK3P51956 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC7.14□□□□□ -1.27
NEK3P51956 RPL31P20-201ENST00000449593 360 ntBASIC7.14□□□□□ -1.27
NEK3P51956 HGF-207ENST00000453018 721 ntTSL 3 BASIC7.14□□□□□ -1.27
NEK3P51956 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
NEK3P51956 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC7.14□□□□□ -1.27
NEK3P51956 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.14□□□□□ -1.27
NEK3P51956 RN7SL868P-201ENST00000485915 303 ntBASIC7.14□□□□□ -1.27
NEK3P51956 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC7.14□□□□□ -1.27
NEK3P51956 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.14□□□□□ -1.27
NEK3P51956 WDR45BP1-201ENST00000583470 1029 ntBASIC7.14□□□□□ -1.27
NEK3P51956 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.14□□□□□ -1.27
NEK3P51956 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.14□□□□□ -1.27
NEK3P51956 ZNF658B-201ENST00000602828 3408 ntBASIC7.14□□□□□ -1.27
NEK3P51956 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC7.14□□□□□ -1.27
NEK3P51956 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.14□□□□□ -1.27
NEK3P51956 RN7SL126P-201ENST00000616400 299 ntBASIC7.14□□□□□ -1.27
NEK3P51956 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.14□□□□□ -1.27
NEK3P51956 AC005753.1-201ENST00000623837 618 ntBASIC7.14□□□□□ -1.27
NEK3P51956 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.14□□□□□ -1.27
NEK3P51956 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.14□□□□□ -1.27
NEK3P51956 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
NEK3P51956 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
NEK3P51956 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.14□□□□□ -1.27
NEK3P51956 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 CLCA3P-203ENST00000490028 2781 ntBASIC7.14□□□□□ -1.27
NEK3P51956 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEK3P51956 AL021877.2-201ENST00000624442 10684 ntBASIC7.14□□□□□ -1.27
NEK3P51956 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
NEK3P51956 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NEK3P51956 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.13□□□□□ -1.27
NEK3P51956 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NEK3P51956 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
NEK3P51956 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
NEK3P51956 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
NEK3P51956 WBP11P1-201ENST00000562560 1931 ntBASIC7.13□□□□□ -1.27
NEK3P51956 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.13□□□□□ -1.27
NEK3P51956 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.13□□□□□ -1.27
NEK3P51956 DDX43P1-201ENST00000510713 1763 ntBASIC7.13□□□□□ -1.27
NEK3P51956 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.13□□□□□ -1.27
NEK3P51956 AP000641.1-201ENST00000531988 1639 ntBASIC7.13□□□□□ -1.27
NEK3P51956 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
NEK3P51956 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
NEK3P51956 AL512353.3-201ENST00000417517 1326 ntBASIC7.13□□□□□ -1.27
NEK3P51956 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.13□□□□□ -1.27
NEK3P51956 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.13□□□□□ -1.27
NEK3P51956 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NEK3P51956 RN7SKP107-201ENST00000364157 290 ntBASIC7.13□□□□□ -1.27
NEK3P51956 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC7.13□□□□□ -1.27
NEK3P51956 SEPT7P8-201ENST00000413308 775 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms