Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PTPN9P43378 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PTPN9P43378 SNORA38B-201ENST00000363524 131 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.94□□□□□ -1.3
PTPN9P43378 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
PTPN9P43378 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.94□□□□□ -1.3
PTPN9P43378 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.94□□□□□ -1.3
PTPN9P43378 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.94□□□□□ -1.3
PTPN9P43378 RN7SKP198-201ENST00000459286 306 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 AC115223.1-201ENST00000466377 870 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 RN7SL655P-201ENST00000486087 298 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 RN7SL350P-201ENST00000492591 299 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.94□□□□□ -1.3
PTPN9P43378 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.94□□□□□ -1.3
PTPN9P43378 RN7SKP196-201ENST00000516267 345 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.94□□□□□ -1.3
PTPN9P43378 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.94□□□□□ -1.3
PTPN9P43378 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.94□□□□□ -1.3
PTPN9P43378 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.94□□□□□ -1.3
PTPN9P43378 AC089984.3-201ENST00000552838 363 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.94□□□□□ -1.3
PTPN9P43378 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.94□□□□□ -1.3
PTPN9P43378 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.94□□□□□ -1.3
PTPN9P43378 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.94□□□□□ -1.3
PTPN9P43378 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.94□□□□□ -1.3
PTPN9P43378 OR7A11P-201ENST00000597719 953 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 AC245052.7-201ENST00000601161 359 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.94□□□□□ -1.3
PTPN9P43378 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PTPN9P43378 MIR6070-201ENST00000613967 103 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 MIR6883-201ENST00000614952 78 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 AC005277.2-201ENST00000617898 390 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
PTPN9P43378 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
PTPN9P43378 SNX18P10-201ENST00000625014 519 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.94□□□□□ -1.3
PTPN9P43378 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.94□□□□□ -1.3
PTPN9P43378 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PTPN9P43378 CCDC150P1-201ENST00000537123 2215 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PTPN9P43378 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PTPN9P43378 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
PTPN9P43378 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PTPN9P43378 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PTPN9P43378 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PTPN9P43378 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PTPN9P43378 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.94□□□□□ -1.3
PTPN9P43378 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PTPN9P43378 AC009831.5-201ENST00000624000 3189 ntBASIC6.94□□□□□ -1.3
PTPN9P43378 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PTPN9P43378 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.93□□□□□ -1.3
PTPN9P43378 AL139384.2-201ENST00000613809 3590 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PTPN9P43378 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PTPN9P43378 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.93□□□□□ -1.3
PTPN9P43378 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PTPN9P43378 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
PTPN9P43378 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PTPN9P43378 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PTPN9P43378 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.93□□□□□ -1.3
PTPN9P43378 AC013488.1-201ENST00000526618 1838 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 FDPSP5-201ENST00000399474 1057 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 AL353133.1-201ENST00000407695 401 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 OR52N3P-201ENST00000413417 934 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PTPN9P43378 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
PTPN9P43378 BMS1P11-201ENST00000442351 885 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 UBBP5-201ENST00000446970 266 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.93□□□□□ -1.3
PTPN9P43378 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.93□□□□□ -1.3
PTPN9P43378 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC6.93□□□□□ -1.3
PTPN9P43378 BMS1P9-201ENST00000457640 885 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
PTPN9P43378 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.93□□□□□ -1.3
PTPN9P43378 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.93□□□□□ -1.3
PTPN9P43378 SNORA58-201ENST00000505219 137 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.93□□□□□ -1.3
PTPN9P43378 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
PTPN9P43378 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.93□□□□□ -1.3
PTPN9P43378 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.93□□□□□ -1.3
PTPN9P43378 PPIAP14-201ENST00000577627 496 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.93□□□□□ -1.3
PTPN9P43378 AC012065.3-201ENST00000602736 439 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 AL049840.5-201ENST00000602827 552 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 AL356986.1-201ENST00000604085 341 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 AL157899.1-201ENST00000604110 936 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 AC025171.4-201ENST00000607250 1047 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 AL157762.1-201ENST00000619612 415 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 AC138627.1-204ENST00000641894 765 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.93□□□□□ -1.3
PTPN9P43378 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PTPN9P43378 AC062029.1-202ENST00000606164 3651 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 PSMC1P4-201ENST00000515236 1327 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 AC022613.3-201ENST00000560740 1346 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PTPN9P43378 BRD7P1-201ENST00000557705 1915 ntBASIC6.93□□□□□ -1.3
PTPN9P43378 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms