Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SSR1P43307 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
SSR1P43307 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SSR1P43307 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SSR1P43307 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SSR1P43307 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SSR1P43307 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
SSR1P43307 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
SSR1P43307 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SSR1P43307 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
SSR1P43307 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC7.15□□□□□ -1.26
SSR1P43307 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.15□□□□□ -1.26
SSR1P43307 MRPS21P2-201ENST00000424704 264 ntBASIC7.15□□□□□ -1.26
SSR1P43307 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.15□□□□□ -1.26
SSR1P43307 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SSR1P43307 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.26
SSR1P43307 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
SSR1P43307 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC7.15□□□□□ -1.26
SSR1P43307 RPS26P11-201ENST00000463445 348 ntBASIC7.15□□□□□ -1.26
SSR1P43307 RPS26P6-201ENST00000475156 348 ntBASIC7.15□□□□□ -1.26
SSR1P43307 AC068522.1-201ENST00000482895 345 ntBASIC7.15□□□□□ -1.26
SSR1P43307 RN7SL776P-201ENST00000493390 268 ntBASIC7.15□□□□□ -1.26
SSR1P43307 AC106760.2-201ENST00000504159 619 ntBASIC7.15□□□□□ -1.26
SSR1P43307 ENPP7P3-201ENST00000509123 241 ntBASIC7.15□□□□□ -1.26
SSR1P43307 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
SSR1P43307 NF1P12-201ENST00000549593 583 ntBASIC7.15□□□□□ -1.26
SSR1P43307 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC7.15□□□□□ -1.26
SSR1P43307 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC7.15□□□□□ -1.26
SSR1P43307 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.15□□□□□ -1.26
SSR1P43307 RN7SL199P-201ENST00000578752 281 ntBASIC7.15□□□□□ -1.26
SSR1P43307 RN7SL656P-201ENST00000579044 281 ntBASIC7.15□□□□□ -1.26
SSR1P43307 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.15□□□□□ -1.26
SSR1P43307 RN7SL404P-201ENST00000582421 281 ntBASIC7.15□□□□□ -1.26
SSR1P43307 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC7.15□□□□□ -1.26
SSR1P43307 AL035410.2-201ENST00000604963 864 ntBASIC7.15□□□□□ -1.26
SSR1P43307 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.15□□□□□ -1.26
SSR1P43307 AC025287.2-201ENST00000621911 668 ntBASIC7.15□□□□□ -1.26
SSR1P43307 AC018558.4-201ENST00000622153 281 ntBASIC7.15□□□□□ -1.26
SSR1P43307 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.15□□□□□ -1.26
SSR1P43307 AC120057.5-201ENST00000623840 154 ntBASIC7.15□□□□□ -1.26
SSR1P43307 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.15□□□□□ -1.26
SSR1P43307 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SSR1P43307 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SSR1P43307 CREM-216ENST00000429130 1476 ntTSL 5 BASIC7.15□□□□□ -1.27
SSR1P43307 AC102941.1-201ENST00000567616 1537 ntBASIC7.15□□□□□ -1.27
SSR1P43307 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SSR1P43307 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
SSR1P43307 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SSR1P43307 Z95114.1-201ENST00000624264 14574 ntBASIC7.15□□□□□ -1.27
SSR1P43307 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.15□□□□□ -1.27
SSR1P43307 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.15□□□□□ -1.27
SSR1P43307 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SSR1P43307 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
SSR1P43307 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC7.15□□□□□ -1.27
SSR1P43307 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSR1P43307 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSR1P43307 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.14□□□□□ -1.27
SSR1P43307 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SSR1P43307 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.14□□□□□ -1.27
SSR1P43307 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.14□□□□□ -1.27
SSR1P43307 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SSR1P43307 AL080312.1-201ENST00000256654 824 ntBASIC7.14□□□□□ -1.27
SSR1P43307 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC7.14□□□□□ -1.27
SSR1P43307 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSR1P43307 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SSR1P43307 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.14□□□□□ -1.27
SSR1P43307 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SSR1P43307 PDCL3P5-201ENST00000398028 722 ntBASIC7.14□□□□□ -1.27
SSR1P43307 RN7SKP137-201ENST00000411074 307 ntBASIC7.14□□□□□ -1.27
SSR1P43307 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.14□□□□□ -1.27
SSR1P43307 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SSR1P43307 FO082842.1-201ENST00000423552 1370 ntBASIC7.14□□□□□ -1.27
SSR1P43307 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSR1P43307 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
SSR1P43307 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SSR1P43307 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.14□□□□□ -1.27
SSR1P43307 H3F3BP1-201ENST00000440551 403 ntBASIC7.14□□□□□ -1.27
SSR1P43307 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.14□□□□□ -1.27
SSR1P43307 GOT2P2-201ENST00000450663 1251 ntBASIC7.14□□□□□ -1.27
SSR1P43307 ST13P21-201ENST00000453250 1098 ntBASIC7.14□□□□□ -1.27
SSR1P43307 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
SSR1P43307 MEF2AP1-201ENST00000454867 863 ntBASIC7.14□□□□□ -1.27
SSR1P43307 SRP68P2-201ENST00000456184 254 ntBASIC7.14□□□□□ -1.27
SSR1P43307 MED28P7-201ENST00000456611 530 ntBASIC7.14□□□□□ -1.27
SSR1P43307 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC7.14□□□□□ -1.27
SSR1P43307 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.14□□□□□ -1.27
SSR1P43307 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SSR1P43307 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
SSR1P43307 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC7.14□□□□□ -1.27
SSR1P43307 PDCL3P1-201ENST00000534575 734 ntBASIC7.14□□□□□ -1.27
SSR1P43307 PSMC1P8-201ENST00000536820 1296 ntBASIC7.14□□□□□ -1.27
SSR1P43307 AC024651.2-201ENST00000562480 2098 ntBASIC7.14□□□□□ -1.27
SSR1P43307 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.14□□□□□ -1.27
SSR1P43307 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SSR1P43307 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.14□□□□□ -1.27
SSR1P43307 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.14□□□□□ -1.27
SSR1P43307 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC7.14□□□□□ -1.27
SSR1P43307 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SSR1P43307 AC010333.3-201ENST00000615100 402 ntBASIC7.14□□□□□ -1.27
SSR1P43307 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms