Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
POLR2AP24928 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
POLR2AP24928 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
POLR2AP24928 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.61□□□□□ -1.19
POLR2AP24928 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
POLR2AP24928 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.61□□□□□ -1.19
POLR2AP24928 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.61□□□□□ -1.19
POLR2AP24928 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 MIR323A-201ENST00000362199 86 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 RN7SKP286-201ENST00000410894 299 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.6□□□□□ -1.19
POLR2AP24928 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.6□□□□□ -1.19
POLR2AP24928 SNX18P26-201ENST00000458433 740 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 PSMA2P2-201ENST00000504319 686 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.6□□□□□ -1.19
POLR2AP24928 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.6□□□□□ -1.19
POLR2AP24928 AC092451.2-201ENST00000538746 658 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 AC010547.6-201ENST00000571789 193 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 SNORD95-201ENST00000579879 68 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.6□□□□□ -1.19
POLR2AP24928 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.6□□□□□ -1.19
POLR2AP24928 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.6□□□□□ -1.19
POLR2AP24928 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.6□□□□□ -1.19
POLR2AP24928 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
POLR2AP24928 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
POLR2AP24928 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.6□□□□□ -1.19
POLR2AP24928 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC7.6□□□□□ -1.19
POLR2AP24928 AC083806.2-201ENST00000617795 2685 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 CR788268.1-201ENST00000603931 1809 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.6□□□□□ -1.19
POLR2AP24928 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.6□□□□□ -1.19
POLR2AP24928 AL512637.1-201ENST00000439523 1231 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 AC011476.1-201ENST00000466725 307 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 RN7SL643P-201ENST00000471845 291 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.6□□□□□ -1.19
POLR2AP24928 CR383658.1-201ENST00000514609 734 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 AC106785.4-201ENST00000569492 412 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 AC090236.2-201ENST00000587933 1101 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 AL157899.1-201ENST00000604110 936 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.6□□□□□ -1.19
POLR2AP24928 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 AC023245.2-201ENST00000530760 2978 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
POLR2AP24928 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
POLR2AP24928 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
POLR2AP24928 AL353807.3-201ENST00000500626 2505 ntBASIC7.6□□□□□ -1.19
POLR2AP24928 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
POLR2AP24928 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.59□□□□□ -1.19
POLR2AP24928 LRRC37A6P-202ENST00000448648 5444 ntBASIC7.59□□□□□ -1.19
POLR2AP24928 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
POLR2AP24928 AC130360.2-201ENST00000533477 1556 ntBASIC7.59□□□□□ -1.19
POLR2AP24928 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.59□□□□□ -1.19
POLR2AP24928 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
POLR2AP24928 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
POLR2AP24928 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
POLR2AP24928 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
POLR2AP24928 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
POLR2AP24928 RN7SKP199-201ENST00000410325 305 ntBASIC7.59□□□□□ -1.19
POLR2AP24928 RNA5SP178-201ENST00000410380 128 ntBASIC7.59□□□□□ -1.19
POLR2AP24928 RNU6-233P-201ENST00000410845 141 ntBASIC7.59□□□□□ -1.19
POLR2AP24928 GTF3AP1-201ENST00000416942 1004 ntBASIC7.59□□□□□ -1.19
POLR2AP24928 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.59□□□□□ -1.19
POLR2AP24928 AL157884.1-201ENST00000424561 454 ntBASIC7.59□□□□□ -1.19
POLR2AP24928 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.59□□□□□ -1.19
POLR2AP24928 RPSAP41-201ENST00000439695 860 ntBASIC7.59□□□□□ -1.19
POLR2AP24928 AP006222.1-205ENST00000450734 457 ntBASIC7.59□□□□□ -1.19
POLR2AP24928 RPSAP39-201ENST00000467439 883 ntBASIC7.59□□□□□ -1.19
POLR2AP24928 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
POLR2AP24928 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.59□□□□□ -1.19
POLR2AP24928 MIR6719-201ENST00000622428 87 ntBASIC7.59□□□□□ -1.19
POLR2AP24928 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.59□□□□□ -1.19
POLR2AP24928 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.59□□□□□ -1.19
POLR2AP24928 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
POLR2AP24928 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
POLR2AP24928 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
POLR2AP24928 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
POLR2AP24928 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.59□□□□□ -1.19
POLR2AP24928 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
POLR2AP24928 CASC19-238ENST00000641523 1558 ntBASIC7.59□□□□□ -1.19
POLR2AP24928 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
POLR2AP24928 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
POLR2AP24928 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
POLR2AP24928 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.2
POLR2AP24928 AC093278.2-201ENST00000564956 2485 ntBASIC7.59□□□□□ -1.2
POLR2AP24928 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms