Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RN7SL208P-201ENST00000577964 296 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 MIR4732-201ENST00000581873 76 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.4□□□□□ -1.54
CCL3L1P16619 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.4□□□□□ -1.54
CCL3L1P16619 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCL3L1P16619 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.4□□□□□ -1.54
CCL3L1P16619 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
CCL3L1P16619 U1.41-201ENST00000617626 165 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 AP001264.1-201ENST00000620602 703 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 AC211486.4-201ENST00000621495 113 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 AL138693.1-201ENST00000622219 129 ntBASIC5.4□□□□□ -1.54
CCL3L1P16619 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.4□□□□□ -1.54
CCL3L1P16619 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.4□□□□□ -1.54
CCL3L1P16619 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.4□□□□□ -1.54
CCL3L1P16619 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.4□□□□□ -1.54
CCL3L1P16619 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCL3L1P16619 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CCL3L1P16619 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCL3L1P16619 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
CCL3L1P16619 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CCL3L1P16619 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCL3L1P16619 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCL3L1P16619 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCL3L1P16619 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.4□□□□□ -1.55
CCL3L1P16619 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCL3L1P16619 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.55
CCL3L1P16619 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCL3L1P16619 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC5.39□□□□□ -1.55
CCL3L1P16619 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 AC006213.6-201ENST00000623722 4179 ntBASIC5.39□□□□□ -1.55
CCL3L1P16619 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CCL3L1P16619 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCL3L1P16619 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCL3L1P16619 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCL3L1P16619 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCL3L1P16619 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.39□□□□□ -1.55
CCL3L1P16619 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 AL359092.1-201ENST00000417156 265 ntBASIC5.39□□□□□ -1.55
CCL3L1P16619 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.39□□□□□ -1.55
CCL3L1P16619 GAPDHP37-201ENST00000442317 968 ntBASIC5.39□□□□□ -1.55
CCL3L1P16619 AL031681.1-201ENST00000443304 400 ntBASIC5.39□□□□□ -1.55
CCL3L1P16619 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 MRPL57P6-201ENST00000506570 309 ntBASIC5.39□□□□□ -1.55
CCL3L1P16619 AC093664.1-201ENST00000511779 289 ntBASIC5.39□□□□□ -1.55
CCL3L1P16619 SCARNA5-201ENST00000516201 276 ntBASIC5.39□□□□□ -1.55
CCL3L1P16619 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 OR52K3P-201ENST00000531655 943 ntBASIC5.39□□□□□ -1.55
CCL3L1P16619 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.39□□□□□ -1.55
CCL3L1P16619 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CCL3L1P16619 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.39□□□□□ -1.55
CCL3L1P16619 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.39□□□□□ -1.55
CCL3L1P16619 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.39□□□□□ -1.55
CCL3L1P16619 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.39□□□□□ -1.55
CCL3L1P16619 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.39□□□□□ -1.55
CCL3L1P16619 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.39□□□□□ -1.55
CCL3L1P16619 AL078623.1-201ENST00000602702 907 ntBASIC5.39□□□□□ -1.55
CCL3L1P16619 AC025171.4-201ENST00000607250 1047 ntBASIC5.39□□□□□ -1.55
CCL3L1P16619 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.39□□□□□ -1.55
CCL3L1P16619 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 SNX18P10-201ENST00000625014 519 ntBASIC5.39□□□□□ -1.55
CCL3L1P16619 AC068213.1-201ENST00000625124 226 ntBASIC5.39□□□□□ -1.55
CCL3L1P16619 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CCL3L1P16619 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCL3L1P16619 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
CCL3L1P16619 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCL3L1P16619 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCL3L1P16619 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms