Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 MAPK10-383ENST00000642032 3390 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL6A2P12110 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL6A2P12110 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL6A2P12110 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL6A2P12110 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.11□□□□□ -1.27
COL6A2P12110 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL6A2P12110 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL6A2P12110 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
COL6A2P12110 CUBNP3-201ENST00000457461 1784 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL6A2P12110 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL6A2P12110 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.11□□□□□ -1.27
COL6A2P12110 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL6A2P12110 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL6A2P12110 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL6A2P12110 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.11□□□□□ -1.27
COL6A2P12110 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
COL6A2P12110 OR4F7P-201ENST00000402444 931 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 OR4F1P-201ENST00000405102 938 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 ZNF602P-201ENST00000405929 924 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 VN1R33P-201ENST00000411800 887 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.11□□□□□ -1.27
COL6A2P12110 AL355862.1-201ENST00000412705 353 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 NIFKP3-201ENST00000417799 865 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 MTCO2P21-201ENST00000419780 677 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 ARAFP1-201ENST00000422172 605 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 OR4F2P-201ENST00000424047 938 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 UQCRHP1-204ENST00000424609 274 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 AC073900.1-201ENST00000429766 776 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 AC092447.2-201ENST00000435487 669 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC7.11□□□□□ -1.27
COL6A2P12110 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL6A2P12110 AC011742.2-201ENST00000443818 352 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC7.11□□□□□ -1.27
COL6A2P12110 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.11□□□□□ -1.27
COL6A2P12110 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC7.11□□□□□ -1.27
COL6A2P12110 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.11□□□□□ -1.27
COL6A2P12110 RN7SL508P-201ENST00000464472 303 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.11□□□□□ -1.27
COL6A2P12110 AC015864.1-201ENST00000496512 544 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 AC023794.3-204ENST00000510754 236 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 PGAM4P2-201ENST00000512491 721 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC7.11□□□□□ -1.27
COL6A2P12110 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC7.11□□□□□ -1.27
COL6A2P12110 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC7.11□□□□□ -1.27
COL6A2P12110 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.11□□□□□ -1.27
COL6A2P12110 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC7.11□□□□□ -1.27
COL6A2P12110 AC023827.2-201ENST00000566880 1061 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 TUBAP4-201ENST00000569261 416 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.11□□□□□ -1.27
COL6A2P12110 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
COL6A2P12110 AL606834.3-201ENST00000602615 496 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 AC068802.1-201ENST00000603420 732 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 HMGB1P51-201ENST00000605166 638 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.11□□□□□ -1.27
COL6A2P12110 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.11□□□□□ -1.27
COL6A2P12110 AC112694.2-201ENST00000623697 768 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 AC034229.6-201ENST00000623704 224 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC7.11□□□□□ -1.27
COL6A2P12110 AL596275.2-208ENST00000641192 594 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.11□□□□□ -1.27
COL6A2P12110 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL6A2P12110 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.11□□□□□ -1.27
COL6A2P12110 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL6A2P12110 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL6A2P12110 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
COL6A2P12110 AL358913.2-201ENST00000553881 1548 ntBASIC7.11□□□□□ -1.27
COL6A2P12110 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.11□□□□□ -1.27
COL6A2P12110 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.11□□□□□ -1.27
COL6A2P12110 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
COL6A2P12110 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.1□□□□□ -1.27
COL6A2P12110 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 PRNCR1-201ENST00000635449 12727 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL6A2P12110 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
COL6A2P12110 ZNF29P-201ENST00000225587 168 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 RNA5SP260-201ENST00000363849 111 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 RNU1-24P-201ENST00000364285 165 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 AC006511.2-201ENST00000388966 660 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC7.1□□□□□ -1.27
COL6A2P12110 ARL2BPP3-201ENST00000421226 480 ntBASIC7.1□□□□□ -1.27
COL6A2P12110 AC241520.1-201ENST00000422654 1099 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms