Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXD4P09016 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HOXD4P09016 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HOXD4P09016 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD4P09016 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD4P09016 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD4P09016 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 OLMALINC-203ENST00000641087 3779 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 AP004289.1-201ENST00000436307 2205 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD4P09016 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXD4P09016 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 AC020658.2-201ENST00000559030 4020 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HOXD4P09016 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 AL133260.1-201ENST00000405720 405 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD4P09016 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXD4P09016 RPL7AP51-201ENST00000422016 760 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
HOXD4P09016 AL354794.2-201ENST00000424795 1248 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD4P09016 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
HOXD4P09016 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXD4P09016 SNRPBP1-201ENST00000443634 282 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 GAPDHP20-201ENST00000444107 1007 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXD4P09016 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXD4P09016 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXD4P09016 RPS7P10-201ENST00000464254 603 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 RN7SL160P-201ENST00000468558 284 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXD4P09016 AC095057.1-201ENST00000507583 168 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXD4P09016 IGKV2D-38-201ENST00000518423 240 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXD4P09016 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXD4P09016 OR4A1P-201ENST00000532342 920 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HOXD4P09016 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD4P09016 MIR212-201ENST00000586026 110 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXD4P09016 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXD4P09016 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXD4P09016 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXD4P09016 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXD4P09016 CASC19-232ENST00000641480 1244 ntBASIC6.18□□□□□ -1.42
HOXD4P09016 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXD4P09016 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HOXD4P09016 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
HOXD4P09016 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXD4P09016 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.18□□□□□ -1.42
HOXD4P09016 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HOXD4P09016 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD4P09016 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD4P09016 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD4P09016 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HOXD4P09016 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXD4P09016 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD4P09016 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD4P09016 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD4P09016 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
HOXD4P09016 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD4P09016 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD4P09016 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXD4P09016 RNU1-5P-201ENST00000362684 144 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HOXD4P09016 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXD4P09016 RPL23AP18-201ENST00000416139 468 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXD4P09016 THEM7P-201ENST00000419556 672 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 GSTA6P-201ENST00000424144 582 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 H3F3BP1-201ENST00000440551 403 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXD4P09016 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD4P09016 AP000805.1-201ENST00000471604 784 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD4P09016 RN7SL568P-201ENST00000493069 298 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXD4P09016 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD4P09016 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD4P09016 RN7SKP196-201ENST00000516267 345 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 RN7SKP64-201ENST00000517206 328 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms