Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CLDN5O00501 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CLDN5O00501 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLDN5O00501 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CLDN5O00501 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLDN5O00501 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.91□□□□□ -1.3
CLDN5O00501 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CLDN5O00501 OR2M1P-201ENST00000318104 951 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.91□□□□□ -1.3
CLDN5O00501 RN7SKP171-201ENST00000364417 303 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 RNA5SP77-201ENST00000365394 120 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CLDN5O00501 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLDN5O00501 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLDN5O00501 AC003045.1-201ENST00000398779 713 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.91□□□□□ -1.3
CLDN5O00501 AL139184.1-202ENST00000422303 222 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 Z68868.1-201ENST00000429048 544 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.91□□□□□ -1.3
CLDN5O00501 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.91□□□□□ -1.3
CLDN5O00501 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.91□□□□□ -1.3
CLDN5O00501 RN7SL39P-201ENST00000462264 297 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 AL117692.1-201ENST00000494283 713 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 AC139272.1-201ENST00000505516 640 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.91□□□□□ -1.3
CLDN5O00501 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.91□□□□□ -1.3
CLDN5O00501 AC093816.1-201ENST00000515076 913 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLDN5O00501 AL133399.1-201ENST00000527476 298 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 AP003033.2-201ENST00000528901 805 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 OR52K3P-201ENST00000531655 943 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.91□□□□□ -1.3
CLDN5O00501 SYPL1P2-201ENST00000582878 727 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.91□□□□□ -1.3
CLDN5O00501 AL359704.2-201ENST00000604335 521 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.91□□□□□ -1.3
CLDN5O00501 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.91□□□□□ -1.3
CLDN5O00501 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.91□□□□□ -1.3
CLDN5O00501 AL359195.2-201ENST00000623657 4412 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 AL031123.3-201ENST00000623345 1837 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLDN5O00501 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLDN5O00501 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLDN5O00501 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CLDN5O00501 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.91□□□□□ -1.3
CLDN5O00501 NBPF8-201ENST00000583271 5330 ntBASIC6.91□□□□□ -1.3
CLDN5O00501 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.91□□□□□ -1.3
CLDN5O00501 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CLDN5O00501 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
CLDN5O00501 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CLDN5O00501 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.9□□□□□ -1.3
CLDN5O00501 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.9□□□□□ -1.3
CLDN5O00501 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
CLDN5O00501 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CLDN5O00501 SNORD35A-201ENST00000363389 86 ntBASIC6.9□□□□□ -1.3
CLDN5O00501 RNU1-24P-201ENST00000364285 165 ntBASIC6.9□□□□□ -1.3
CLDN5O00501 RNU1-46P-201ENST00000384425 164 ntBASIC6.9□□□□□ -1.3
CLDN5O00501 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.9□□□□□ -1.3
CLDN5O00501 RPSAP32-201ENST00000432681 526 ntBASIC6.9□□□□□ -1.3
CLDN5O00501 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.9□□□□□ -1.3
CLDN5O00501 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CLDN5O00501 AL139156.3-201ENST00000454802 394 ntBASIC6.9□□□□□ -1.3
CLDN5O00501 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.9□□□□□ -1.3
CLDN5O00501 AC106822.1-201ENST00000502647 526 ntBASIC6.9□□□□□ -1.3
CLDN5O00501 AC083906.1-201ENST00000509298 406 ntBASIC6.9□□□□□ -1.3
CLDN5O00501 AC124891.1-201ENST00000536322 519 ntBASIC6.9□□□□□ -1.3
CLDN5O00501 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.9□□□□□ -1.3
CLDN5O00501 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.9□□□□□ -1.3
CLDN5O00501 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.9□□□□□ -1.3
CLDN5O00501 AC011891.2-201ENST00000604949 397 ntBASIC6.9□□□□□ -1.3
CLDN5O00501 AC012676.3-201ENST00000614983 479 ntBASIC6.9□□□□□ -1.3
CLDN5O00501 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.9□□□□□ -1.3
CLDN5O00501 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.9□□□□□ -1.3
CLDN5O00501 AC130448.2-201ENST00000624082 374 ntBASIC6.9□□□□□ -1.3
CLDN5O00501 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.9□□□□□ -1.3
CLDN5O00501 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC6.9□□□□□ -1.31
CLDN5O00501 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
CLDN5O00501 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
CLDN5O00501 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.9□□□□□ -1.31
CLDN5O00501 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.9□□□□□ -1.31
CLDN5O00501 MAPK10-323ENST00000641493 3207 ntBASIC6.89□□□□□ -1.31
CLDN5O00501 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.89□□□□□ -1.31
CLDN5O00501 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.89□□□□□ -1.31
CLDN5O00501 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CLDN5O00501 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.89□□□□□ -1.31
CLDN5O00501 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLDN5O00501 LPAL2-203ENST00000454031 2498 ntBASIC6.89□□□□□ -1.31
CLDN5O00501 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLDN5O00501 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CLDN5O00501 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CLDN5O00501 AC092821.3-202ENST00000641304 2767 ntBASIC6.89□□□□□ -1.31
CLDN5O00501 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.89□□□□□ -1.31
CLDN5O00501 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CLDN5O00501 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.89□□□□□ -1.31
CLDN5O00501 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CLDN5O00501 RN7SKP250-201ENST00000363924 321 ntBASIC6.89□□□□□ -1.31
CLDN5O00501 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CLDN5O00501 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CLDN5O00501 THEM7P-201ENST00000419556 672 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms