Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GPN2-201ENST00000374133 715 ntTSL 3 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 RNU6-413P-201ENST00000384115 107 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 SNORA75-201ENST00000384158 137 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 U3.18-201ENST00000390880 216 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 RNU6-796P-201ENST00000391086 107 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 RPL10P10-201ENST00000403509 664 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 VN1R12P-201ENST00000403778 876 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 CBX1P3-201ENST00000413296 527 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 HCG21-204ENST00000419481 605 ntTSL 3 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 HIGD1AP12-201ENST00000427832 281 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC007563.3-201ENST00000433233 371 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 RPSAP53-201ENST00000433498 862 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 LARP1BP3-201ENST00000437229 869 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC245517.2-201ENST00000442890 346 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 RPL5P10-201ENST00000445207 894 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 FTH1P27-201ENST00000449509 551 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AURKAPS1-201ENST00000451805 1212 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 SNRPGP9-201ENST00000456025 225 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC037198.2-201ENST00000478845 733 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 RNU6-506P-201ENST00000516553 94 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC106038.2-201ENST00000520706 568 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 IGLV7-35-201ENST00000523314 340 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC007751.2-201ENST00000534173 291 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC125421.2-201ENST00000580370 583 ntTSL 4 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 GMFG-204ENST00000595636 487 ntTSL 2 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC009159.1-201ENST00000618386 642 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 RMST_5.1-201ENST00000618704 126 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC009704.2-201ENST00000618739 483 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 MIR7156-201ENST00000620979 60 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC009093.6-201ENST00000622268 553 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC091953.4-201ENST00000625179 341 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 LYG2-206ENST00000626374 650 ntTSL 5 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC024614.3-201ENST00000637860 256 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 CAP2-203ENST00000465994 1404 ntTSL 2 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 EIF4BP2-201ENST00000416702 1794 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 NEK2P2-201ENST00000438441 1338 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 GC-208ENST00000513476 1567 ntTSL 5 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AP003972.1-201ENST00000625192 5446 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 C8orf48-201ENST00000297324 1445 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AC010132.2-201ENST00000295493 1043 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 MT-TD-201ENST00000387419 68 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AL136968.2-201ENST00000407959 354 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 SLC25A5P2-201ENST00000413713 897 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 GNAI2P2-201ENST00000417003 916 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 RPL4P4-201ENST00000422486 1284 ntBASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.07□□□□□ -1.12
CUEDC1Q9NWM3 OR6R1P-201ENST00000431838 940 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms