Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ITGB1BP2-205ENST00000538820 1439 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AL022322.1-201ENST00000609162 1433 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 LINC01120-201ENST00000437751 1861 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC021491.4-201ENST00000620769 2573 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USB1Q9BQ65 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 DPF3-216ENST00000614862 4221 ntTSL 5 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 SSBP2-212ENST00000509053 1534 ntTSL 2 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USB1Q9BQ65 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 SERPINB2-201ENST00000299502 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USB1Q9BQ65 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USB1Q9BQ65 FIGNL1-206ENST00000433017 3626 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 Y_RNA.67-201ENST00000362870 100 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USB1Q9BQ65 LRMDA-201ENST00000372499 899 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
USB1Q9BQ65 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 PRH2-202ENST00000396400 673 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USB1Q9BQ65 DMKN-205ENST00000414866 867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
USB1Q9BQ65 BX295541.1-201ENST00000417774 250 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 AL161631.1-201ENST00000417933 486 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 HMGB3P20-201ENST00000417997 600 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 FDPSP1-201ENST00000424976 1071 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 FCF1P1-201ENST00000432690 571 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 PRDX2P4-201ENST00000447134 600 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 YAE1D1-203ENST00000448268 425 ntTSL 2 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 COX6CP18-201ENST00000448769 222 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 AL121877.1-201ENST00000453704 622 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 RN7SL754P-201ENST00000470784 266 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 RN7SL538P-201ENST00000494227 304 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 NMNAT3-214ENST00000514703 584 ntTSL 5 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 AC008591.1-202ENST00000515569 462 ntTSL 2 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 HIF1AP1-201ENST00000553642 175 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 AL390334.1-201ENST00000556395 450 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 AC020661.2-201ENST00000560114 134 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 LINC02191-201ENST00000568036 518 ntTSL 4 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 AC087564.1-201ENST00000569751 456 ntTSL 3 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 AP002439.1-201ENST00000588204 480 ntTSL 4 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 ARMCX7P-202ENST00000602449 655 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 AL136363.1-201ENST00000605349 337 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 SRGAP2D-201ENST00000605551 1021 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 AP003789.1-201ENST00000617737 605 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 LINC02028-221ENST00000622169 621 ntTSL 5 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 ZNF2-202ENST00000611463 3737 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USB1Q9BQ65 AL157831.2-201ENST00000564681 3095 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 AL590004.4-201ENST00000566733 7060 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
USB1Q9BQ65 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USB1Q9BQ65 MAPK10-240ENST00000639175 2596 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 AC074043.1-201ENST00000483126 1776 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 PPP1R10P1-201ENST00000531876 1795 ntBASIC8.1□□□□□ -1.11
USB1Q9BQ65 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
USB1Q9BQ65 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 NPIPA7-202ENST00000530217 1331 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 ABCF2P1-201ENST00000465687 1867 ntBASIC8.09□□□□□ -1.11
USB1Q9BQ65 PCDH15-223ENST00000495484 1896 ntTSL 5 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 DMD-212ENST00000378723 4645 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 CYP2C18-202ENST00000339022 1471 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 IL36G-202ENST00000376489 989 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 TDRKH-AS1-201ENST00000389897 992 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
USB1Q9BQ65 IGLV3-25-201ENST00000390305 380 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
USB1Q9BQ65 Z97832.1-201ENST00000402490 328 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms