Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 RNU6-1017P-201ENST00000363613 106 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 RNA5SP442-201ENST00000365050 107 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 AL139100.1-201ENST00000408001 498 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 AL356968.2-201ENST00000412769 1257 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 RPL7AP14-201ENST00000424041 802 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 SNORA81.1-201ENST00000458922 177 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 RN7SL149P-201ENST00000465197 281 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 RPS7P11-201ENST00000484240 586 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 AC146944.3-201ENST00000509969 371 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 OR5M6P-201ENST00000530227 937 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 AC135626.1-201ENST00000556983 435 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 MIR3135A-201ENST00000578460 77 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 FCGR1CP-201ENST00000579737 1127 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 AC104184.1-201ENST00000607513 721 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 Z93930.3-201ENST00000607919 749 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 MIR8082-201ENST00000612488 81 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 U1.34-201ENST00000618578 162 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 AC087894.3-201ENST00000623682 349 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 AC117503.3-201ENST00000623811 601 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 AL049541.2-201ENST00000626377 555 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 MIR665-201ENST00000635949 72 ntBASIC6.62□□□□□ -1.35
VMP1Q96GC9 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VMP1Q96GC9 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
VMP1Q96GC9 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VMP1Q96GC9 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VMP1Q96GC9 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VMP1Q96GC9 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VMP1Q96GC9 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VMP1Q96GC9 AC022034.1-201ENST00000512867 2156 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 CAP1P2-201ENST00000417455 1409 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 AC007342.5-201ENST00000571340 2142 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 FO082842.1-201ENST00000423552 1370 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VMP1Q96GC9 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VMP1Q96GC9 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
VMP1Q96GC9 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 RN7SKP107-201ENST00000364157 290 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
VMP1Q96GC9 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 MEAF6P1-201ENST00000416092 327 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VMP1Q96GC9 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 FTLP17-201ENST00000432567 525 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 BTG3P1-201ENST00000435859 716 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 OR52Y1P-201ENST00000452418 828 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 CR383656.1-201ENST00000484916 377 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 AC026782.2-201ENST00000510845 636 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 SNORA81.2-201ENST00000516868 170 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 CASP1P2-201ENST00000526830 1258 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 ULK4P1-202ENST00000565174 503 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 AC091932.1-201ENST00000569381 427 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.61□□□□□ -1.35
VMP1Q96GC9 AC015818.6-201ENST00000584274 634 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 MIR3159-201ENST00000584572 74 ntBASIC6.61□□□□□ -1.35
VMP1Q96GC9 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms