Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.94□□□□□ -1.46
RFT1Q96AA3 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC5.94□□□□□ -1.46
RFT1Q96AA3 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC5.94□□□□□ -1.46
RFT1Q96AA3 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC5.94□□□□□ -1.46
RFT1Q96AA3 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.94□□□□□ -1.46
RFT1Q96AA3 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFT1Q96AA3 AC099777.1-201ENST00000603779 1070 ntBASIC5.94□□□□□ -1.46
RFT1Q96AA3 AC097467.4-201ENST00000605504 141 ntBASIC5.94□□□□□ -1.46
RFT1Q96AA3 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.94□□□□□ -1.46
RFT1Q96AA3 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.94□□□□□ -1.46
RFT1Q96AA3 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC5.94□□□□□ -1.46
RFT1Q96AA3 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RFT1Q96AA3 AL442128.2-201ENST00000620246 1824 ntBASIC5.94□□□□□ -1.46
RFT1Q96AA3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.94□□□□□ -1.46
RFT1Q96AA3 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC5.94□□□□□ -1.46
RFT1Q96AA3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFT1Q96AA3 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFT1Q96AA3 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RFT1Q96AA3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RFT1Q96AA3 AC079248.1-201ENST00000427568 1546 ntBASIC5.94□□□□□ -1.46
RFT1Q96AA3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.94□□□□□ -1.46
RFT1Q96AA3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFT1Q96AA3 AC005261.2-201ENST00000593427 4258 ntBASIC5.94□□□□□ -1.46
RFT1Q96AA3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFT1Q96AA3 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFT1Q96AA3 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFT1Q96AA3 OR2A3P-202ENST00000641249 1776 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFT1Q96AA3 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFT1Q96AA3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFT1Q96AA3 Z95114.1-201ENST00000624264 14574 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 SNORA30B-201ENST00000365319 129 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 RN7SKP148-201ENST00000410179 275 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 AL357632.1-201ENST00000426688 643 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 RPS21P1-201ENST00000434479 247 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 AC090589.1-201ENST00000473109 362 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 MYL6P4-201ENST00000477911 453 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 AC122713.1-201ENST00000518368 1015 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 AP006587.5-201ENST00000532033 739 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 AL031846.1-201ENST00000560933 314 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 RN7SL199P-201ENST00000578752 281 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 RN7SL656P-201ENST00000579044 281 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 RN7SL404P-201ENST00000582421 281 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 AL589765.5-201ENST00000596133 515 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 RPL12P48-201ENST00000605620 304 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 AL031658.2-201ENST00000616850 651 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFT1Q96AA3 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 JAML-213ENST00000640745 951 ntTSL 5 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 AC007485.2-201ENST00000623493 1667 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFT1Q96AA3 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFT1Q96AA3 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFT1Q96AA3 CR383656.5-201ENST00000547616 1340 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 AC083837.1-201ENST00000565297 2994 ntBASIC5.93□□□□□ -1.46
RFT1Q96AA3 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFT1Q96AA3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFT1Q96AA3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.93□□□□□ -1.46
RFT1Q96AA3 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFT1Q96AA3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFT1Q96AA3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.92□□□□□ -1.46
RFT1Q96AA3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFT1Q96AA3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFT1Q96AA3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
RFT1Q96AA3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFT1Q96AA3 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFT1Q96AA3 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFT1Q96AA3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFT1Q96AA3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RFT1Q96AA3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RFT1Q96AA3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms