Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.93□□□□□ -1.14
SNED1Q8TER0 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.93□□□□□ -1.14
SNED1Q8TER0 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
SNED1Q8TER0 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
SNED1Q8TER0 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
SNED1Q8TER0 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SNED1Q8TER0 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SNED1Q8TER0 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
SNED1Q8TER0 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SNED1Q8TER0 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SNED1Q8TER0 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNED1Q8TER0 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SNED1Q8TER0 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SNED1Q8TER0 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNED1Q8TER0 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNED1Q8TER0 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SNED1Q8TER0 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 AC009166.2-201ENST00000624410 2833 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 HSPD1P9-201ENST00000420325 1636 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 AL359694.2-201ENST00000567753 1615 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 RNA5SP346-201ENST00000363541 121 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 RNA5SP284-201ENST00000384547 118 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 RN7SKP281-201ENST00000410472 352 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNED1Q8TER0 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SNED1Q8TER0 AC023141.3-201ENST00000436698 278 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 RN7SL643P-201ENST00000471845 291 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SNED1Q8TER0 AC139272.1-201ENST00000505516 640 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 AC131392.1-201ENST00000506490 633 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 SNORD46.2-201ENST00000516021 102 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 AC092332.1-201ENST00000563684 829 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 RN7SL404P-201ENST00000582421 281 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 SNORD91A-202ENST00000609620 191 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 AL354718.1-201ENST00000619764 589 ntBASIC7.92□□□□□ -1.14
SNED1Q8TER0 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SNED1Q8TER0 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNED1Q8TER0 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNED1Q8TER0 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNED1Q8TER0 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNED1Q8TER0 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
SNED1Q8TER0 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNED1Q8TER0 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
SNED1Q8TER0 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SNED1Q8TER0 AC016769.2-201ENST00000414815 475 ntBASIC7.91□□□□□ -1.14
SNED1Q8TER0 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 CST12P-201ENST00000457644 362 ntBASIC7.91□□□□□ -1.14
SNED1Q8TER0 AC023194.2-201ENST00000465398 406 ntBASIC7.91□□□□□ -1.14
SNED1Q8TER0 RPL23AP68-201ENST00000480924 445 ntBASIC7.91□□□□□ -1.14
SNED1Q8TER0 PSMA2P2-201ENST00000504319 686 ntBASIC7.91□□□□□ -1.14
SNED1Q8TER0 KHDC1P1-201ENST00000511053 508 ntBASIC7.91□□□□□ -1.14
SNED1Q8TER0 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 AC027544.3-201ENST00000535082 757 ntBASIC7.91□□□□□ -1.14
SNED1Q8TER0 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 AC008555.7-201ENST00000605008 583 ntBASIC7.91□□□□□ -1.14
SNED1Q8TER0 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.91□□□□□ -1.14
SNED1Q8TER0 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SNED1Q8TER0 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.91□□□□□ -1.14
SNED1Q8TER0 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
SNED1Q8TER0 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.9□□□□□ -1.14
SNED1Q8TER0 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
SNED1Q8TER0 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SNED1Q8TER0 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SNED1Q8TER0 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.9□□□□□ -1.14
SNED1Q8TER0 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SNED1Q8TER0 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
SNED1Q8TER0 AC008753.1-201ENST00000423096 284 ntBASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms