Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.61□□□□□ -1.19
CCNA1P78396 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
CCNA1P78396 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCNA1P78396 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCNA1P78396 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCNA1P78396 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.61□□□□□ -1.19
CCNA1P78396 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCNA1P78396 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.61□□□□□ -1.19
CCNA1P78396 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CCNA1P78396 RPL11P4-201ENST00000332269 436 ntBASIC7.61□□□□□ -1.19
CCNA1P78396 RNA5SP65-201ENST00000363166 119 ntBASIC7.61□□□□□ -1.19
CCNA1P78396 RNA5SP435-201ENST00000364044 108 ntBASIC7.61□□□□□ -1.19
CCNA1P78396 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.61□□□□□ -1.19
CCNA1P78396 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.61□□□□□ -1.19
CCNA1P78396 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.61□□□□□ -1.19
CCNA1P78396 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.61□□□□□ -1.19
CCNA1P78396 AC245047.1-201ENST00000433276 873 ntBASIC7.61□□□□□ -1.19
CCNA1P78396 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.61□□□□□ -1.19
CCNA1P78396 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.61□□□□□ -1.19
CCNA1P78396 COX4I1P2-201ENST00000447446 547 ntBASIC7.61□□□□□ -1.19
CCNA1P78396 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.61□□□□□ -1.19
CCNA1P78396 HMGB1P7-201ENST00000450921 612 ntBASIC7.61□□□□□ -1.19
CCNA1P78396 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.61□□□□□ -1.19
CCNA1P78396 RPS10P20-201ENST00000494130 463 ntBASIC7.61□□□□□ -1.19
CCNA1P78396 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.61□□□□□ -1.19
CCNA1P78396 AC018645.1-201ENST00000505003 109 ntBASIC7.61□□□□□ -1.19
CCNA1P78396 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.61□□□□□ -1.19
CCNA1P78396 AC112225.1-201ENST00000508230 297 ntBASIC7.61□□□□□ -1.19
CCNA1P78396 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.61□□□□□ -1.19
CCNA1P78396 PTTG3P-201ENST00000521862 606 ntBASIC7.61□□□□□ -1.19
CCNA1P78396 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.61□□□□□ -1.19
CCNA1P78396 NPIPB14P-203ENST00000532298 987 ntBASIC7.61□□□□□ -1.19
CCNA1P78396 AP003115.1-201ENST00000569849 463 ntBASIC7.61□□□□□ -1.19
CCNA1P78396 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.61□□□□□ -1.19
CCNA1P78396 SNORD91A-202ENST00000609620 191 ntBASIC7.61□□□□□ -1.19
CCNA1P78396 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.61□□□□□ -1.19
CCNA1P78396 MIR6811-201ENST00000620409 58 ntBASIC7.61□□□□□ -1.19
CCNA1P78396 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.61□□□□□ -1.19
CCNA1P78396 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCNA1P78396 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.61□□□□□ -1.19
CCNA1P78396 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CCNA1P78396 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCNA1P78396 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.61□□□□□ -1.19
CCNA1P78396 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCNA1P78396 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCNA1P78396 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCNA1P78396 AP002833.3-201ENST00000625075 2265 ntBASIC7.61□□□□□ -1.19
CCNA1P78396 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCNA1P78396 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CCNA1P78396 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCNA1P78396 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
CCNA1P78396 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.6□□□□□ -1.19
CCNA1P78396 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.6□□□□□ -1.19
CCNA1P78396 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCNA1P78396 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCNA1P78396 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCNA1P78396 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CCNA1P78396 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCNA1P78396 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
CCNA1P78396 AL359092.1-201ENST00000417156 265 ntBASIC7.6□□□□□ -1.19
CCNA1P78396 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.6□□□□□ -1.19
CCNA1P78396 PMS2P9-201ENST00000441237 515 ntBASIC7.6□□□□□ -1.19
CCNA1P78396 GTF2IP14-201ENST00000441415 586 ntBASIC7.6□□□□□ -1.19
CCNA1P78396 RPL5P7-201ENST00000444235 813 ntBASIC7.6□□□□□ -1.19
CCNA1P78396 OR2L9P-201ENST00000444456 913 ntBASIC7.6□□□□□ -1.19
CCNA1P78396 AC094085.1-201ENST00000468914 584 ntBASIC7.6□□□□□ -1.19
CCNA1P78396 AC026826.1-201ENST00000493002 361 ntBASIC7.6□□□□□ -1.19
CCNA1P78396 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCNA1P78396 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.6□□□□□ -1.19
CCNA1P78396 AC005632.2-201ENST00000564271 828 ntBASIC7.6□□□□□ -1.19
CCNA1P78396 AC010327.2-201ENST00000587647 488 ntBASIC7.6□□□□□ -1.19
CCNA1P78396 AL136097.3-201ENST00000611097 505 ntBASIC7.6□□□□□ -1.19
CCNA1P78396 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CCNA1P78396 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCNA1P78396 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.6□□□□□ -1.19
CCNA1P78396 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.6□□□□□ -1.19
CCNA1P78396 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCNA1P78396 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
CCNA1P78396 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CCNA1P78396 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
CCNA1P78396 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.6□□□□□ -1.19
CCNA1P78396 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CCNA1P78396 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.6□□□□□ -1.19
CCNA1P78396 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.6□□□□□ -1.19
CCNA1P78396 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CCNA1P78396 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCNA1P78396 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.6□□□□□ -1.19
CCNA1P78396 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCNA1P78396 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.59□□□□□ -1.19
CCNA1P78396 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCNA1P78396 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.59□□□□□ -1.19
CCNA1P78396 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCNA1P78396 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCNA1P78396 AC087392.3-202ENST00000358446 1754 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCNA1P78396 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCNA1P78396 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCNA1P78396 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.59□□□□□ -1.19
CCNA1P78396 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CCNA1P78396 AC003045.1-201ENST00000398779 713 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms