Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.02□□□□□ -1.29
LHX1P48742 RPL19P11-201ENST00000495944 589 ntBASIC7.02□□□□□ -1.29
LHX1P48742 AC083906.1-201ENST00000509298 406 ntBASIC7.02□□□□□ -1.29
LHX1P48742 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.02□□□□□ -1.29
LHX1P48742 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.02□□□□□ -1.29
LHX1P48742 RPL3P13-201ENST00000550415 216 ntBASIC7.02□□□□□ -1.29
LHX1P48742 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.02□□□□□ -1.29
LHX1P48742 RN7SL366P-201ENST00000577957 292 ntBASIC7.02□□□□□ -1.29
LHX1P48742 AL356986.1-201ENST00000604085 341 ntBASIC7.02□□□□□ -1.29
LHX1P48742 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.02□□□□□ -1.29
LHX1P48742 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.02□□□□□ -1.29
LHX1P48742 AC018692.2-201ENST00000624130 348 ntBASIC7.02□□□□□ -1.29
LHX1P48742 AC114546.4-201ENST00000624413 369 ntBASIC7.02□□□□□ -1.29
LHX1P48742 SNX18P10-201ENST00000625014 519 ntBASIC7.02□□□□□ -1.29
LHX1P48742 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LHX1P48742 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LHX1P48742 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
LHX1P48742 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LHX1P48742 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LHX1P48742 CLCA3P-203ENST00000490028 2781 ntBASIC7.02□□□□□ -1.29
LHX1P48742 SPATA31C1-201ENST00000420021 3895 ntBASIC7.01□□□□□ -1.29
LHX1P48742 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.01□□□□□ -1.29
LHX1P48742 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
LHX1P48742 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
LHX1P48742 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.01□□□□□ -1.29
LHX1P48742 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.01□□□□□ -1.29
LHX1P48742 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.01□□□□□ -1.29
LHX1P48742 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
LHX1P48742 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
LHX1P48742 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
LHX1P48742 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 Z68868.1-201ENST00000429048 544 ntBASIC7.01□□□□□ -1.29
LHX1P48742 AC234771.2-201ENST00000445718 597 ntBASIC7.01□□□□□ -1.29
LHX1P48742 RPL23AP68-201ENST00000480924 445 ntBASIC7.01□□□□□ -1.29
LHX1P48742 AC139272.1-201ENST00000505516 640 ntBASIC7.01□□□□□ -1.29
LHX1P48742 AC131392.1-201ENST00000506490 633 ntBASIC7.01□□□□□ -1.29
LHX1P48742 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.01□□□□□ -1.29
LHX1P48742 AC093664.1-201ENST00000511779 289 ntBASIC7.01□□□□□ -1.29
LHX1P48742 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.01□□□□□ -1.29
LHX1P48742 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.01□□□□□ -1.29
LHX1P48742 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.01□□□□□ -1.29
LHX1P48742 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC7.01□□□□□ -1.29
LHX1P48742 AC124891.1-201ENST00000536322 519 ntBASIC7.01□□□□□ -1.29
LHX1P48742 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.01□□□□□ -1.29
LHX1P48742 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.01□□□□□ -1.29
LHX1P48742 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.01□□□□□ -1.29
LHX1P48742 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.01□□□□□ -1.29
LHX1P48742 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.01□□□□□ -1.29
LHX1P48742 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.01□□□□□ -1.29
LHX1P48742 NDUFB9P1-201ENST00000604683 510 ntBASIC7.01□□□□□ -1.29
LHX1P48742 AL137246.1-201ENST00000607072 977 ntBASIC7.01□□□□□ -1.29
LHX1P48742 AC025171.4-201ENST00000607250 1047 ntBASIC7.01□□□□□ -1.29
LHX1P48742 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.01□□□□□ -1.29
LHX1P48742 AC005393.1-201ENST00000617916 584 ntBASIC7.01□□□□□ -1.29
LHX1P48742 MIR6823-201ENST00000622118 61 ntBASIC7.01□□□□□ -1.29
LHX1P48742 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.01□□□□□ -1.29
LHX1P48742 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.01□□□□□ -1.29
LHX1P48742 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.01□□□□□ -1.29
LHX1P48742 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
LHX1P48742 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.01□□□□□ -1.29
LHX1P48742 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.01□□□□□ -1.29
LHX1P48742 AC125603.4-201ENST00000621942 2699 ntBASIC7.01□□□□□ -1.29
LHX1P48742 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.01□□□□□ -1.29
LHX1P48742 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LHX1P48742 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
LHX1P48742 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
LHX1P48742 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7□□□□□ -1.29
LHX1P48742 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7□□□□□ -1.29
LHX1P48742 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
LHX1P48742 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7□□□□□ -1.29
LHX1P48742 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms