Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.97□□□□□ -1.13
CNGA1P29973 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CNGA1P29973 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CNGA1P29973 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.97□□□□□ -1.13
CNGA1P29973 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.97□□□□□ -1.13
CNGA1P29973 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
CNGA1P29973 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.97□□□□□ -1.13
CNGA1P29973 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CNGA1P29973 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CNGA1P29973 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.97□□□□□ -1.13
CNGA1P29973 RNU1-5P-201ENST00000362684 144 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CNGA1P29973 MIR323B-201ENST00000385269 82 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.97□□□□□ -1.13
CNGA1P29973 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 RPSAP32-201ENST00000432681 526 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.97□□□□□ -1.13
CNGA1P29973 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CNGA1P29973 AL606490.8-201ENST00000441624 319 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.97□□□□□ -1.13
CNGA1P29973 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.97□□□□□ -1.13
CNGA1P29973 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC7.97□□□□□ -1.13
CNGA1P29973 CYCSP53-201ENST00000455540 265 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 AC104339.1-201ENST00000465478 348 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 RPS3AP49-201ENST00000472161 790 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 OR7E22P-201ENST00000478335 1035 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.97□□□□□ -1.13
CNGA1P29973 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.97□□□□□ -1.13
CNGA1P29973 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC7.97□□□□□ -1.13
CNGA1P29973 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.97□□□□□ -1.13
CNGA1P29973 AC009729.1-201ENST00000548873 1133 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 PPIAP6-201ENST00000557078 499 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.97□□□□□ -1.13
CNGA1P29973 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.97□□□□□ -1.13
CNGA1P29973 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.97□□□□□ -1.13
CNGA1P29973 AC093283.1-201ENST00000565306 1075 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.97□□□□□ -1.13
CNGA1P29973 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CNGA1P29973 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.97□□□□□ -1.13
CNGA1P29973 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CNGA1P29973 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CNGA1P29973 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
CNGA1P29973 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.97□□□□□ -1.13
CNGA1P29973 AL035563.1-201ENST00000609087 1539 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 NBPF8-201ENST00000583271 5330 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CNGA1P29973 AC092701.1-201ENST00000623627 1551 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CNGA1P29973 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.96□□□□□ -1.13
CNGA1P29973 AP002833.3-201ENST00000625075 2265 ntBASIC7.96□□□□□ -1.13
CNGA1P29973 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
CNGA1P29973 AC139426.3-201ENST00000605648 2059 ntBASIC7.96□□□□□ -1.13
CNGA1P29973 AL589993.1-201ENST00000407450 2524 ntBASIC7.96□□□□□ -1.13
CNGA1P29973 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.96□□□□□ -1.13
CNGA1P29973 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.96□□□□□ -1.13
CNGA1P29973 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
CNGA1P29973 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
CNGA1P29973 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CNGA1P29973 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CNGA1P29973 RNU1-65P-201ENST00000363919 148 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 RN7SKP269-201ENST00000365545 319 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC7.96□□□□□ -1.14
CNGA1P29973 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.96□□□□□ -1.14
CNGA1P29973 AL358178.1-201ENST00000407698 397 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 MIR1282-201ENST00000408865 101 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 RN7SKP254-201ENST00000410685 310 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 EEF1B2P8-201ENST00000414101 671 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.96□□□□□ -1.14
CNGA1P29973 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CNGA1P29973 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CNGA1P29973 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.96□□□□□ -1.14
CNGA1P29973 MYL6P3-201ENST00000436904 432 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC7.96□□□□□ -1.14
CNGA1P29973 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.96□□□□□ -1.14
CNGA1P29973 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CNGA1P29973 MTND2P39-201ENST00000457230 764 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 SNORA81.1-201ENST00000458922 177 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 RN7SL705P-201ENST00000481678 294 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 AC122718.2-201ENST00000505325 591 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.96□□□□□ -1.14
CNGA1P29973 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.96□□□□□ -1.14
CNGA1P29973 PGAM4P2-201ENST00000512491 721 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.96□□□□□ -1.14
CNGA1P29973 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.96□□□□□ -1.14
CNGA1P29973 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.96□□□□□ -1.14
CNGA1P29973 MIR3154-201ENST00000577829 84 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.96□□□□□ -1.14
CNGA1P29973 AC010327.2-201ENST00000587647 488 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 AC073593.1-201ENST00000624500 411 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 AC127071.1-201ENST00000624997 712 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.96□□□□□ -1.14
CNGA1P29973 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.96□□□□□ -1.14
CNGA1P29973 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CNGA1P29973 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
CNGA1P29973 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
CNGA1P29973 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CNGA1P29973 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CNGA1P29973 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CNGA1P29973 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CNGA1P29973 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms