Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHC1P29353 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SHC1P29353 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SHC1P29353 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.09□□□□□ -1.43
SHC1P29353 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHC1P29353 RNA5SP382-201ENST00000363355 112 ntBASIC6.09□□□□□ -1.43
SHC1P29353 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.09□□□□□ -1.43
SHC1P29353 AC092634.1-201ENST00000366505 199 ntBASIC6.09□□□□□ -1.43
SHC1P29353 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.09□□□□□ -1.43
SHC1P29353 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SHC1P29353 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SHC1P29353 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.09□□□□□ -1.43
SHC1P29353 GAPDHP57-201ENST00000424400 585 ntBASIC6.09□□□□□ -1.43
SHC1P29353 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.09□□□□□ -1.43
SHC1P29353 PAICSP2-201ENST00000429118 1150 ntBASIC6.09□□□□□ -1.43
SHC1P29353 BMS1P11-201ENST00000442351 885 ntBASIC6.09□□□□□ -1.43
SHC1P29353 AL121578.2-201ENST00000448797 447 ntBASIC6.09□□□□□ -1.43
SHC1P29353 BMS1P9-201ENST00000457640 885 ntBASIC6.09□□□□□ -1.43
SHC1P29353 RPSAP24-201ENST00000461543 873 ntBASIC6.09□□□□□ -1.43
SHC1P29353 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SHC1P29353 RN7SL790P-201ENST00000474043 298 ntBASIC6.09□□□□□ -1.43
SHC1P29353 RN7SL382P-201ENST00000482631 282 ntBASIC6.09□□□□□ -1.43
SHC1P29353 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.09□□□□□ -1.43
SHC1P29353 MTND6P8-201ENST00000503471 522 ntBASIC6.09□□□□□ -1.43
SHC1P29353 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SHC1P29353 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.09□□□□□ -1.43
SHC1P29353 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.09□□□□□ -1.43
SHC1P29353 SNRPCP6-201ENST00000528310 210 ntBASIC6.09□□□□□ -1.43
SHC1P29353 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.09□□□□□ -1.43
SHC1P29353 AC007068.2-201ENST00000543168 395 ntBASIC6.09□□□□□ -1.43
SHC1P29353 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.09□□□□□ -1.43
SHC1P29353 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHC1P29353 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.09□□□□□ -1.43
SHC1P29353 AC022001.1-201ENST00000605193 268 ntBASIC6.09□□□□□ -1.43
SHC1P29353 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.09□□□□□ -1.43
SHC1P29353 AL354718.1-201ENST00000619764 589 ntBASIC6.09□□□□□ -1.43
SHC1P29353 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.09□□□□□ -1.43
SHC1P29353 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHC1P29353 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.09□□□□□ -1.43
SHC1P29353 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SHC1P29353 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHC1P29353 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHC1P29353 AC010329.1-201ENST00000593903 8328 ntBASIC6.09□□□□□ -1.43
SHC1P29353 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.09□□□□□ -1.43
SHC1P29353 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SHC1P29353 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.09□□□□□ -1.44
SHC1P29353 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
SHC1P29353 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.09□□□□□ -1.44
SHC1P29353 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SHC1P29353 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SHC1P29353 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.09□□□□□ -1.44
SHC1P29353 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
SHC1P29353 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHC1P29353 AC034229.2-201ENST00000566945 2508 ntBASIC6.08□□□□□ -1.44
SHC1P29353 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHC1P29353 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHC1P29353 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.08□□□□□ -1.44
SHC1P29353 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHC1P29353 Z97989.1-201ENST00000531702 2421 ntBASIC6.08□□□□□ -1.44
SHC1P29353 AC004023.1-201ENST00000561473 1744 ntBASIC6.08□□□□□ -1.44
SHC1P29353 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.08□□□□□ -1.44
SHC1P29353 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.08□□□□□ -1.44
SHC1P29353 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHC1P29353 RPL24P4-201ENST00000326586 421 ntBASIC6.08□□□□□ -1.44
SHC1P29353 RNA5SP65-201ENST00000363166 119 ntBASIC6.08□□□□□ -1.44
SHC1P29353 RNU1-55P-201ENST00000365510 158 ntBASIC6.08□□□□□ -1.44
SHC1P29353 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SHC1P29353 RNA5SP474-201ENST00000391234 90 ntBASIC6.08□□□□□ -1.44
SHC1P29353 AL353133.1-201ENST00000407695 401 ntBASIC6.08□□□□□ -1.44
SHC1P29353 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.08□□□□□ -1.44
SHC1P29353 AHCYP8-201ENST00000425108 209 ntBASIC6.08□□□□□ -1.44
SHC1P29353 AL451136.1-201ENST00000435399 325 ntBASIC6.08□□□□□ -1.44
SHC1P29353 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.08□□□□□ -1.44
SHC1P29353 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.08□□□□□ -1.44
SHC1P29353 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.08□□□□□ -1.44
SHC1P29353 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.08□□□□□ -1.44
SHC1P29353 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.08□□□□□ -1.44
SHC1P29353 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.08□□□□□ -1.44
SHC1P29353 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.08□□□□□ -1.44
SHC1P29353 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.08□□□□□ -1.44
SHC1P29353 AC009567.2-201ENST00000502989 349 ntBASIC6.08□□□□□ -1.44
SHC1P29353 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.08□□□□□ -1.44
SHC1P29353 RN7SKP64-201ENST00000517206 328 ntBASIC6.08□□□□□ -1.44
SHC1P29353 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.08□□□□□ -1.44
SHC1P29353 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.08□□□□□ -1.44
SHC1P29353 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.08□□□□□ -1.44
SHC1P29353 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.08□□□□□ -1.44
SHC1P29353 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.08□□□□□ -1.44
SHC1P29353 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.08□□□□□ -1.44
SHC1P29353 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.08□□□□□ -1.44
SHC1P29353 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.08□□□□□ -1.44
SHC1P29353 AC018558.5-201ENST00000565840 952 ntBASIC6.08□□□□□ -1.44
SHC1P29353 AC068408.1-201ENST00000577406 1144 ntBASIC6.08□□□□□ -1.44
SHC1P29353 MIR744-201ENST00000578242 98 ntBASIC6.08□□□□□ -1.44
SHC1P29353 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.08□□□□□ -1.44
SHC1P29353 AC009779.8-201ENST00000641684 4384 ntBASIC6.08□□□□□ -1.44
SHC1P29353 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SHC1P29353 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHC1P29353 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.08□□□□□ -1.44
SHC1P29353 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms