Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RPL7P27-201ENST00000403775 720 ntBASIC6.43□□□□□ -1.38
CD40P25942 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.43□□□□□ -1.38
CD40P25942 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.43□□□□□ -1.38
CD40P25942 RNU4-74P-201ENST00000411280 161 ntBASIC6.43□□□□□ -1.38
CD40P25942 RN7SKP30-201ENST00000411373 334 ntBASIC6.43□□□□□ -1.38
CD40P25942 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.43□□□□□ -1.38
CD40P25942 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 EEF1GP7-201ENST00000422983 703 ntBASIC6.43□□□□□ -1.38
CD40P25942 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.43□□□□□ -1.38
CD40P25942 FTH1P5-201ENST00000425761 545 ntBASIC6.43□□□□□ -1.38
CD40P25942 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.43□□□□□ -1.38
CD40P25942 GTF2IP3-201ENST00000433887 494 ntBASIC6.43□□□□□ -1.38
CD40P25942 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.43□□□□□ -1.38
CD40P25942 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 AL117351.1-201ENST00000438864 766 ntBASIC6.43□□□□□ -1.38
CD40P25942 FUNDC2P2-202ENST00000443452 493 ntBASIC6.43□□□□□ -1.38
CD40P25942 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 OR6K5P-201ENST00000447050 945 ntBASIC6.43□□□□□ -1.38
CD40P25942 AC004022.1-201ENST00000447766 1066 ntBASIC6.43□□□□□ -1.38
CD40P25942 TRY2P-201ENST00000448860 689 ntBASIC6.43□□□□□ -1.38
CD40P25942 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.43□□□□□ -1.38
CD40P25942 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.43□□□□□ -1.38
CD40P25942 RPL34P34-201ENST00000465389 354 ntBASIC6.43□□□□□ -1.38
CD40P25942 AL928654.1-201ENST00000476081 354 ntBASIC6.43□□□□□ -1.38
CD40P25942 RN7SL152P-201ENST00000484176 298 ntBASIC6.43□□□□□ -1.38
CD40P25942 AC009153.1-201ENST00000485799 496 ntBASIC6.43□□□□□ -1.38
CD40P25942 AC107398.1-201ENST00000486904 505 ntBASIC6.43□□□□□ -1.38
CD40P25942 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.43□□□□□ -1.38
CD40P25942 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.43□□□□□ -1.38
CD40P25942 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC6.43□□□□□ -1.38
CD40P25942 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.43□□□□□ -1.38
CD40P25942 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.43□□□□□ -1.38
CD40P25942 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.43□□□□□ -1.38
CD40P25942 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.43□□□□□ -1.38
CD40P25942 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.43□□□□□ -1.38
CD40P25942 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC6.43□□□□□ -1.38
CD40P25942 AC008088.1-201ENST00000580993 280 ntBASIC6.43□□□□□ -1.38
CD40P25942 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.43□□□□□ -1.38
CD40P25942 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.43□□□□□ -1.38
CD40P25942 AC068020.1-201ENST00000594215 661 ntBASIC6.43□□□□□ -1.38
CD40P25942 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.43□□□□□ -1.38
CD40P25942 AC130352.1-201ENST00000602979 661 ntBASIC6.43□□□□□ -1.38
CD40P25942 AL136139.1-201ENST00000605568 222 ntBASIC6.43□□□□□ -1.38
CD40P25942 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.43□□□□□ -1.38
CD40P25942 AC026367.2-201ENST00000610630 553 ntBASIC6.43□□□□□ -1.38
CD40P25942 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.43□□□□□ -1.38
CD40P25942 AC079416.3-201ENST00000624479 549 ntBASIC6.43□□□□□ -1.38
CD40P25942 AL035425.4-201ENST00000624509 1063 ntBASIC6.43□□□□□ -1.38
CD40P25942 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.43□□□□□ -1.38
CD40P25942 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.43□□□□□ -1.38
CD40P25942 BX649567.1-201ENST00000642071 1134 ntBASIC6.43□□□□□ -1.38
CD40P25942 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.43□□□□□ -1.38
CD40P25942 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CD40P25942 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.43□□□□□ -1.38
CD40P25942 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 NAMPTP1-201ENST00000440465 2514 ntBASIC6.43□□□□□ -1.38
CD40P25942 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.43□□□□□ -1.38
CD40P25942 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CD40P25942 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CD40P25942 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC6.43□□□□□ -1.38
CD40P25942 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 MTND5P31-201ENST00000419366 1374 ntBASIC6.43□□□□□ -1.38
CD40P25942 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.43□□□□□ -1.38
CD40P25942 IL24-207ENST00000611909 1621 ntTSL 3 BASIC6.43□□□□□ -1.38
CD40P25942 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CD40P25942 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC6.42□□□□□ -1.38
CD40P25942 AC138627.1-203ENST00000641872 1680 ntBASIC6.42□□□□□ -1.38
CD40P25942 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
CD40P25942 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CD40P25942 HDAC1P1-201ENST00000455482 1445 ntBASIC6.42□□□□□ -1.38
CD40P25942 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC6.42□□□□□ -1.38
CD40P25942 AC104581.5-201ENST00000624171 7141 ntBASIC6.42□□□□□ -1.38
CD40P25942 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
CD40P25942 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC6.42□□□□□ -1.38
CD40P25942 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CD40P25942 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC6.42□□□□□ -1.38
CD40P25942 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CD40P25942 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC6.42□□□□□ -1.38
CD40P25942 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CD40P25942 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CD40P25942 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CD40P25942 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.42□□□□□ -1.38
CD40P25942 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.42□□□□□ -1.38
CD40P25942 AC074375.1-201ENST00000372993 192 ntBASIC6.42□□□□□ -1.38
CD40P25942 YWHAZP4-201ENST00000392459 708 ntBASIC6.42□□□□□ -1.38
CD40P25942 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC6.42□□□□□ -1.38
CD40P25942 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.42□□□□□ -1.38
CD40P25942 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CD40P25942 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.42□□□□□ -1.38
CD40P25942 AC239800.1-201ENST00000442049 719 ntBASIC6.42□□□□□ -1.38
CD40P25942 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC6.42□□□□□ -1.38
CD40P25942 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms