Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPTA1P02549 AC022150.4-201ENST00000598322 2848 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 HSPD1P9-201ENST00000420325 1636 ntBASIC6.11□□□□□ -1.43
SPTA1P02549 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SPTA1P02549 SNORA51.9-201ENST00000384295 124 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 AL020997.1-201ENST00000446554 349 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.1□□□□□ -1.43
SPTA1P02549 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.1□□□□□ -1.43
SPTA1P02549 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.1□□□□□ -1.43
SPTA1P02549 AC013283.1-201ENST00000557282 492 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 AC005632.2-201ENST00000564271 828 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.1□□□□□ -1.43
SPTA1P02549 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.1□□□□□ -1.43
SPTA1P02549 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC6.1□□□□□ -1.43
SPTA1P02549 AC118658.2-201ENST00000618697 459 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 AL731566.2-201ENST00000618971 317 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 AC017037.4-201ENST00000624526 826 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SPTA1P02549 AL008638.3-201ENST00000623027 5182 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SPTA1P02549 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SPTA1P02549 AL356019.2-201ENST00000556738 3829 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SPTA1P02549 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
SPTA1P02549 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SPTA1P02549 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SPTA1P02549 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SPTA1P02549 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SPTA1P02549 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
SPTA1P02549 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC6.1□□□□□ -1.43
SPTA1P02549 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SPTA1P02549 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SPTA1P02549 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.1□□□□□ -1.43
SPTA1P02549 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SPTA1P02549 RAC1P4-201ENST00000419413 579 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 AC066692.1-201ENST00000421721 457 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 RN7SL39P-201ENST00000462264 297 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 RN7SL104P-201ENST00000498686 293 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.1□□□□□ -1.43
SPTA1P02549 AC105420.1-201ENST00000504389 582 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.1□□□□□ -1.43
SPTA1P02549 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.1□□□□□ -1.43
SPTA1P02549 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.1□□□□□ -1.43
SPTA1P02549 SNORD95-201ENST00000579879 68 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 RPSAP75-201ENST00000605848 301 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.1□□□□□ -1.43
SPTA1P02549 CHODL-206ENST00000400135 2136 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SPTA1P02549 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SPTA1P02549 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SPTA1P02549 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.1□□□□□ -1.43
SPTA1P02549 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.1□□□□□ -1.43
SPTA1P02549 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
SPTA1P02549 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SPTA1P02549 AL451064.2-201ENST00000623514 1654 ntBASIC6.1□□□□□ -1.43
SPTA1P02549 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC6.1□□□□□ -1.43
SPTA1P02549 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SPTA1P02549 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC6.09□□□□□ -1.43
SPTA1P02549 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SPTA1P02549 COX6B1P3-201ENST00000312310 260 ntBASIC6.09□□□□□ -1.43
SPTA1P02549 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SPTA1P02549 RN7SKP108-201ENST00000411367 328 ntBASIC6.09□□□□□ -1.43
SPTA1P02549 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SPTA1P02549 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.09□□□□□ -1.43
SPTA1P02549 AC094019.1-201ENST00000434678 472 ntBASIC6.09□□□□□ -1.43
SPTA1P02549 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.09□□□□□ -1.43
SPTA1P02549 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SPTA1P02549 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.09□□□□□ -1.43
SPTA1P02549 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.09□□□□□ -1.43
SPTA1P02549 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SPTA1P02549 AL035410.2-201ENST00000604963 864 ntBASIC6.09□□□□□ -1.43
SPTA1P02549 MIR6820-201ENST00000611508 62 ntBASIC6.09□□□□□ -1.43
SPTA1P02549 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.09□□□□□ -1.43
SPTA1P02549 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SPTA1P02549 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SPTA1P02549 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.09□□□□□ -1.43
SPTA1P02549 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SPTA1P02549 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SPTA1P02549 AC007114.2-201ENST00000576014 4281 ntBASIC6.09□□□□□ -1.43
SPTA1P02549 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC6.09□□□□□ -1.43
SPTA1P02549 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC6.09□□□□□ -1.43
SPTA1P02549 AC005839.1-201ENST00000624148 3213 ntBASIC6.09□□□□□ -1.43
SPTA1P02549 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SPTA1P02549 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SPTA1P02549 HSPA8P11-201ENST00000508840 1898 ntBASIC6.09□□□□□ -1.43
SPTA1P02549 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SPTA1P02549 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC6.09□□□□□ -1.43
SPTA1P02549 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.09□□□□□ -1.43
SPTA1P02549 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.09□□□□□ -1.43
SPTA1P02549 OR52I1-201ENST00000450052 1050 ntBASIC6.09□□□□□ -1.43
SPTA1P02549 RPS27AP2-201ENST00000457576 465 ntBASIC6.09□□□□□ -1.43
SPTA1P02549 AC023141.9-201ENST00000458734 412 ntBASIC6.09□□□□□ -1.43
SPTA1P02549 IGKV3D-31-201ENST00000519131 281 ntBASIC6.09□□□□□ -1.43
SPTA1P02549 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.09□□□□□ -1.43
SPTA1P02549 AC023827.2-201ENST00000566880 1061 ntBASIC6.09□□□□□ -1.43
SPTA1P02549 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SPTA1P02549 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
SPTA1P02549 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms