Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC027575.3-201ENST00000583058 2747 ntBASIC8.28□□□□□ -1.08
SCN11AQ9UI33 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SCN11AQ9UI33 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SCN11AQ9UI33 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC8.28□□□□□ -1.08
SCN11AQ9UI33 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SCN11AQ9UI33 AC005332.9-201ENST00000620266 2921 ntBASIC8.28□□□□□ -1.08
SCN11AQ9UI33 RNA5SP435-201ENST00000364044 108 ntBASIC8.27□□□□□ -1.08
SCN11AQ9UI33 SUGT1P2-201ENST00000379452 992 ntBASIC8.27□□□□□ -1.08
SCN11AQ9UI33 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
SCN11AQ9UI33 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC8.27□□□□□ -1.08
SCN11AQ9UI33 SOCS5P1-201ENST00000440415 949 ntBASIC8.27□□□□□ -1.08
SCN11AQ9UI33 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.27□□□□□ -1.08
SCN11AQ9UI33 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC8.27□□□□□ -1.08
SCN11AQ9UI33 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
SCN11AQ9UI33 AL136097.3-201ENST00000611097 505 ntBASIC8.27□□□□□ -1.08
SCN11AQ9UI33 AL512356.3-201ENST00000623005 461 ntBASIC8.27□□□□□ -1.08
SCN11AQ9UI33 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC8.27□□□□□ -1.08
SCN11AQ9UI33 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
SCN11AQ9UI33 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC8.27□□□□□ -1.08
SCN11AQ9UI33 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
SCN11AQ9UI33 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
SCN11AQ9UI33 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 SNORD16-201ENST00000362803 99 ntBASIC8.27□□□□□ -1.09
SCN11AQ9UI33 HSD17B7P1-201ENST00000412419 1017 ntBASIC8.27□□□□□ -1.09
SCN11AQ9UI33 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 CDY8P-201ENST00000428380 1279 ntBASIC8.27□□□□□ -1.09
SCN11AQ9UI33 LYPLA1P1-201ENST00000434514 622 ntBASIC8.27□□□□□ -1.09
SCN11AQ9UI33 CDY20P-201ENST00000447528 1279 ntBASIC8.27□□□□□ -1.09
SCN11AQ9UI33 AL359839.1-201ENST00000451975 1160 ntBASIC8.27□□□□□ -1.09
SCN11AQ9UI33 OR13C1P-201ENST00000457612 963 ntBASIC8.27□□□□□ -1.09
SCN11AQ9UI33 MTND6P8-201ENST00000503471 522 ntBASIC8.27□□□□□ -1.09
SCN11AQ9UI33 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 AC007346.1-201ENST00000569208 867 ntBASIC8.27□□□□□ -1.09
SCN11AQ9UI33 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 AC008555.7-201ENST00000605008 583 ntBASIC8.27□□□□□ -1.09
SCN11AQ9UI33 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 AC010624.4-201ENST00000597606 1351 ntBASIC8.27□□□□□ -1.09
SCN11AQ9UI33 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCN11AQ9UI33 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 AC007998.1-201ENST00000474156 672 ntBASIC8.26□□□□□ -1.09
SCN11AQ9UI33 RPL12P31-201ENST00000478433 450 ntBASIC8.26□□□□□ -1.09
SCN11AQ9UI33 RN7SL714P-201ENST00000487050 298 ntBASIC8.26□□□□□ -1.09
SCN11AQ9UI33 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 IGLVIV-64-201ENST00000518581 301 ntBASIC8.26□□□□□ -1.09
SCN11AQ9UI33 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 MIR7159-201ENST00000620587 66 ntBASIC8.26□□□□□ -1.09
SCN11AQ9UI33 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 AL359694.2-201ENST00000567753 1615 ntBASIC8.26□□□□□ -1.09
SCN11AQ9UI33 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
SCN11AQ9UI33 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC115283.1-201ENST00000427353 400 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms